RNA id: TU37282


Basic Information

Item Value
RNA id TU37282
length 237
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G32882
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13240506 ~ 13240742 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTGGCTCAACACTGTGCTGTACCTTTAAATAATTCTCTCCCATTGCCTGTTTGAACCTTCCTGATTCTGTCCCAAAGGATATGCATGATACAAGATCTTTTATAACACTGTAGCATCATGAAGCATACTGTTCATCGCTCAACCTTCCCTGTATTTCTATAACGCAGCATAGGACTAGAAAGCTTTTTAAGCTTTTAGAGATTAAAATTCTGTGATTTTCTTTTTCTTTTCTTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37280 lncRNA downstream 834 13239339 ~ 13239672 (-) True G32880
TU37268 lncRNA downstream 4374 13235668 ~ 13236132 (-) True G32868
TU37267 lncRNA downstream 5845 13234436 ~ 13234661 (-) True G32867
TU37261 lncRNA downstream 47819 13192466 ~ 13192687 (-) True G32862
TU37257 lncRNA downstream 57049 13183228 ~ 13183457 (-) True G32858
TU37317 lncRNA upstream 60286 13301028 ~ 13301405 (-) True G32917
TU37636 lncRNA upstream 185744 13426486 ~ 13445538 (-) True G33195
TU37660 lncRNA upstream 431367 13672109 ~ 13692651 (-) False G33217
TU37661 lncRNA upstream 431367 13672109 ~ 13699995 (-) False G33217
TU37662 lncRNA upstream 431367 13672109 ~ 13674912 (-) True G33217
CI01000004_13208157_13210917.mRNA mRNA downstream 29589 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_13127356_13168751.mRNA mRNA downstream 71755 13127356 ~ 13168751 (-) False CI01000004_13127356_13168751
CI01000004_13094468_13114401.mRNA mRNA downstream 125508 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_13089864_13091636.mRNA mRNA downstream 148837 13088583 ~ 13091669 (-) True CI01000004_13089864_13091636
CI01000004_13086552_13088659.mRNA mRNA downstream 151608 13084824 ~ 13088898 (-) True CI01000004_13086552_13088659
CI01000004_13354130_13419831.mRNA mRNA upstream 113388 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13720679_13777075.mRNA mRNA upstream 479715 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_14041671_14073418.mRNA mRNA upstream 800334 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_14115087_14115790.mRNA mRNA upstream 874263 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
CI01000004_14389315_14396492.mRNA mRNA upstream 1148293 14389035 ~ 14396492 (-) True CI01000004_14389315_14396492
TU36531 other downstream 855726 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 1459555 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 1827599 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 2489865 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 3833585 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 1310058 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 1328051 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 1337716 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 1340664 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 1344429 14585171 ~ 14585745 (-) True G33756

Expression Profile