RNA id: TU37661



Basic Information


Item Value
RNA id TU37661
length 1097
lncRNA type antisense_over
GC content 0.52
exon number 6
gene id G33217
representative False

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13672109 ~ 13699995 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GACATGAGGGTGAGTACTTAATGACAGTAATTTCATTTTTGGGTGAACTATCCCTTTAAAAGGTAGCTGCCTATAAGCATTTAACTAACTTTTGTAACAGCTTGAGAATCGTCTTACAAACCTGGGCCCCAGTTCATCTTCACAGCGCCAAGTGAACTCTCCAAAGCTCTCATAGCGCTGGTTATAGTGGTAAAGTACTCGGTGGAGGGTTGGTGAGCCCAGGTCCATGAGCGTGTTATAGGCGGTCTGCTGTTCCTTGCCACTGGTGTAGCCGTTGAACAGGTTATAAATCTTGTCTGCTATTTCTTGAGCCTTGACGTCATCCACGGCAGGACAGGGAGTTTTGATTGTCACCTCACTCGGACTGGAACGCCGACCCGTGTTGTCCACCGCCCACAGCCGAAACATGTATGTGGTGTCTGGCTCCAGGCATCGCATGATCAGTGAGATAGATGAGAGGGGATCATGGATGTCCCCGAGCATCACACATGGAGATTTGGCCCCCGACATGATGTCATCCACAAAACTCAACATAGTCTCTGTCTCAACTTTGGAGTGATCAGTCCGCTCTGTCACCTTCTCTTGACTGATGAGGTAATCAACAATTCTCACCCCGATTGGTGGCTCTGCATGATTCCATTCTATGATGATCAATGAACTGCTGGGCTCATATGAATGGGATAGCTTGAGCATAGGTTGAGGCAGAGGAGCACATGTCGGAAGTCCATCTGTGCCAAAAGCACTGGAATCACATCGACACCAGTCATCAATAACATCACCTTTAGCAGAGCACCACAGTACACTCATCATGGCCTCCTGCAGAGCCTGGTAGGTCTCGTTGCTGTTGACCAGTTCGTAGATCGGCGTGGCTTTAGTGATGTTGAGCAGCACAGGTTCTGCAGGACGTGCAGGCCCAGGGCTCATGTGGCAGAGGTGACAGGACAGAGGGCACTGGCCCTGGCTGCTGCAGTCCATGCGCACCCCTGCCGCCATGCGCTTGGCACCCGAGTCCAGCAGGCTGGCAATGTATGCTGGGTAAGTAAGCGTGCGTGGTTCTTTGTCCCGCTCCTCCGACTCGTCTGACGGAGAGTTTCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37636 lncRNA downstream 226571 13426486 ~ 13445538 (-) True G33195
TU37317 lncRNA downstream 370704 13301028 ~ 13301405 (-) True G32917
TU37282 lncRNA downstream 431367 13240506 ~ 13240742 (-) True G32882
TU37280 lncRNA downstream 432437 13239339 ~ 13239672 (-) True G32880
TU37268 lncRNA downstream 435977 13235668 ~ 13236132 (-) True G32868
TU37752 lncRNA upstream 96729 13796724 ~ 13797925 (-) True G33305
TU37801 lncRNA upstream 116795 13816790 ~ 13817036 (-) True G33350
TU37802 lncRNA upstream 118043 13818038 ~ 13818389 (-) True G33351
TU37805 lncRNA upstream 120469 13820464 ~ 13820729 (-) True G33354
TU37864 lncRNA upstream 330916 14030911 ~ 14032798 (-) True G33402
CI01000004_13354130_13419831.mRNA mRNA downstream 252278 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13208157_13210917.mRNA mRNA downstream 461192 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_13127356_13168751.mRNA mRNA downstream 503358 13127356 ~ 13168751 (-) False CI01000004_13127356_13168751
CI01000004_13094468_13114401.mRNA mRNA downstream 557111 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_13089864_13091636.mRNA mRNA downstream 580440 13088583 ~ 13091669 (-) True CI01000004_13089864_13091636
CI01000004_13720679_13777075.mRNA mRNA upstream 20462 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_14041671_14073418.mRNA mRNA upstream 341081 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_14115087_14115790.mRNA mRNA upstream 415010 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
CI01000004_14389315_14396492.mRNA mRNA upstream 689040 14389035 ~ 14396492 (-) True CI01000004_14389315_14396492
CI01000004_14425486_14425711.mRNA mRNA upstream 725369 14425364 ~ 14425711 (-) False CI01000004_14425486_14425711
TU36531 other downstream 1287329 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 1891158 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 2259202 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 2921468 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 4265188 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 850805 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 868798 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 878463 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 881411 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 885176 14585171 ~ 14585745 (-) True G33756

Expression Profile