RNA id: TU37802



Basic Information


Item Value
RNA id TU37802
length 352
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G33351
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13818038 ~ 13818389 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTTACTGAAATGTTCAGTGTTCCGACAGAAGAACTTCAGTGTTGAGTAGAATGAGGCTTGAGGCTTTTTTCCCTCCATTATATTACTTTGGTCTTACCACTCTCACCACACTCACAGTCATCTATCATCTGGCCCCCAGTGATCAAAGTGGAAGAGGCAGTGTTTTTTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTCAGCTGGCTTGATGGATCTAGTGCCACTAGGTTCATCAGCAAATGAAAGGCTTACCGATTCCCAACACACCTGGCCAGCAAGCATTCAGGCCCATGACTTTGATTTGTACCAAAGACTTTTTATTTTTTCCTTTTTTATCTACTTTGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37801 lncRNA downstream 1002 13816790 ~ 13817036 (-) True G33350
TU37752 lncRNA downstream 20113 13796724 ~ 13797925 (-) True G33305
TU37661 lncRNA downstream 118043 13672109 ~ 13699995 (-) False G33217
TU37660 lncRNA downstream 125387 13672109 ~ 13692651 (-) False G33217
TU37662 lncRNA downstream 143126 13672109 ~ 13674912 (-) True G33217
TU37805 lncRNA upstream 2075 13820464 ~ 13820729 (-) True G33354
TU37864 lncRNA upstream 212522 14030911 ~ 14032798 (-) True G33402
TU37939 lncRNA upstream 278860 14097249 ~ 14097451 (-) True G33468
TU37941 lncRNA upstream 279929 14098318 ~ 14098546 (-) True G33470
TU37944 lncRNA upstream 306777 14125166 ~ 14125387 (-) True G33473
CI01000004_13720679_13777075.mRNA mRNA downstream 40963 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_13354130_13419831.mRNA mRNA downstream 398207 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13208157_13210917.mRNA mRNA downstream 607121 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_13127356_13168751.mRNA mRNA downstream 649287 13127356 ~ 13168751 (-) False CI01000004_13127356_13168751
CI01000004_13094468_13114401.mRNA mRNA downstream 703040 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_14041671_14073418.mRNA mRNA upstream 222687 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_14115087_14115790.mRNA mRNA upstream 296616 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
CI01000004_14389315_14396492.mRNA mRNA upstream 570646 14389035 ~ 14396492 (-) True CI01000004_14389315_14396492
CI01000004_14425486_14425711.mRNA mRNA upstream 606975 14425364 ~ 14425711 (-) False CI01000004_14425486_14425711
CI01000004_14543631_14551256.mRNA mRNA upstream 723126 14541515 ~ 14551352 (-) False CI01000004_14543631_14551256
TU36531 other downstream 1433258 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 2037087 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 2405131 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 3067397 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 4411117 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 732411 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 750404 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 760069 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 763017 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 766782 14585171 ~ 14585745 (-) True G33756

Expression Profile