RNA id: TU37944



Basic Information


Item Value
RNA id TU37944
length 222
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G33473
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14125166 ~ 14125387 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAAAAAAAAAAAAAAAAAAAAATCATAAAACCCCATAGGAAAATCTCAAGGGAATCAGTGGCCATTTTTTACTAAAAATTAAAAATAAAACTATTACATTTTAATTTTTTGTTTATTGAAATAAAATAAAATATAAATATTAGATGAAAAAATTAAACTTAAAAATGTTAGAAATTAGAAAACTACAAAAAAAAAAAACTGCCTTAGCAATAAACTGAAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37941 lncRNA downstream 26620 14098318 ~ 14098546 (-) True G33470
TU37939 lncRNA downstream 27715 14097249 ~ 14097451 (-) True G33468
TU37864 lncRNA downstream 92368 14030911 ~ 14032798 (-) True G33402
TU37805 lncRNA downstream 304437 13820464 ~ 13820729 (-) True G33354
TU37802 lncRNA downstream 306777 13818038 ~ 13818389 (-) True G33351
TU37948 lncRNA upstream 6906 14132293 ~ 14132511 (-) True G33477
TU37951 lncRNA upstream 17601 14142988 ~ 14143249 (-) True G33480
TU38020 lncRNA upstream 140350 14265737 ~ 14266188 (-) True G33549
TU37912 lncRNA upstream 226462 14351849 ~ 14356026 (-) True G33443
TU38050 lncRNA upstream 240767 14366154 ~ 14366406 (-) True G33579
CI01000004_14115087_14115790.mRNA mRNA downstream 9376 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
CI01000004_14041671_14073418.mRNA mRNA downstream 51396 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_13720679_13777075.mRNA mRNA downstream 348091 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_13354130_13419831.mRNA mRNA downstream 705335 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13208157_13210917.mRNA mRNA downstream 914249 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_14389315_14396492.mRNA mRNA upstream 263648 14389035 ~ 14396492 (-) True CI01000004_14389315_14396492
CI01000004_14425486_14425711.mRNA mRNA upstream 299977 14425364 ~ 14425711 (-) False CI01000004_14425486_14425711
CI01000004_14543631_14551256.mRNA mRNA upstream 416128 14541515 ~ 14551352 (-) False CI01000004_14543631_14551256
CI01000004_14557340_14560918.mRNA mRNA upstream 431894 14557281 ~ 14561042 (-) False CI01000004_14557340_14560918
CI01000004_14563131_14563558.mRNA mRNA upstream 436682 14562069 ~ 14563801 (-) True CI01000004_14563131_14563558
TU36531 other downstream 1740386 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 2344215 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 2712259 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 3374525 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 4718245 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 425413 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 443406 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 453071 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 456019 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 459784 14585171 ~ 14585745 (-) True G33756

Expression Profile