RNA id: TU37951



Basic Information


Item Value
RNA id TU37951
length 262
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G33480
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14142988 ~ 14143249 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAGTAGTCAGGAGTTAGAAGATTAACCTCGGTGGACTTGAACTTGAAAAATGGTGTGTATTTCGTCTTTCCGCGTTTTAAACAACATTCCTTCTCATGTTCATTCATGTTTATTTGATGCTATAAATTAACTAGTAGGAAGAGATGATCGGTTCACGAGCCGCTTGAGCTGAGGGCTACAGCAATCTGTCACGACACATTAAAGAGCCACAAAACGGTTTTTATTGTTCGAATTTCTTAAATTACACAATTTGAAAGCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37948 lncRNA downstream 10477 14132293 ~ 14132511 (-) True G33477
TU37944 lncRNA downstream 17601 14125166 ~ 14125387 (-) True G33473
TU37941 lncRNA downstream 44442 14098318 ~ 14098546 (-) True G33470
TU37939 lncRNA downstream 45537 14097249 ~ 14097451 (-) True G33468
TU37864 lncRNA downstream 110190 14030911 ~ 14032798 (-) True G33402
TU38020 lncRNA upstream 122488 14265737 ~ 14266188 (-) True G33549
TU37912 lncRNA upstream 208600 14351849 ~ 14356026 (-) True G33443
TU38050 lncRNA upstream 222905 14366154 ~ 14366406 (-) True G33579
TU38052 lncRNA upstream 227576 14370825 ~ 14375113 (-) True G33581
TU38054 lncRNA upstream 235018 14378267 ~ 14378539 (-) True G33583
CI01000004_14115087_14115790.mRNA mRNA downstream 27198 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
CI01000004_14041671_14073418.mRNA mRNA downstream 69218 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_13720679_13777075.mRNA mRNA downstream 365913 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_13354130_13419831.mRNA mRNA downstream 723157 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13208157_13210917.mRNA mRNA downstream 932071 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_14389315_14396492.mRNA mRNA upstream 245786 14389035 ~ 14396492 (-) True CI01000004_14389315_14396492
CI01000004_14425486_14425711.mRNA mRNA upstream 282115 14425364 ~ 14425711 (-) False CI01000004_14425486_14425711
CI01000004_14543631_14551256.mRNA mRNA upstream 398266 14541515 ~ 14551352 (-) False CI01000004_14543631_14551256
CI01000004_14557340_14560918.mRNA mRNA upstream 414032 14557281 ~ 14561042 (-) False CI01000004_14557340_14560918
CI01000004_14563131_14563558.mRNA mRNA upstream 418820 14562069 ~ 14563801 (-) True CI01000004_14563131_14563558
TU36531 other downstream 1758208 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 2362037 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 2730081 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 3392347 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 4736067 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 407551 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 425544 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 435209 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 438157 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 441922 14585171 ~ 14585745 (-) True G33756

Expression Profile