RNA id: TU74618


Basic Information

Item Value
RNA id TU74618
length 422
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G65562
representative True

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 8065933 ~ 8066354 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTCCTTCGCTCCCAGGGTTCTCAGCCTCGCCCCACTCAAGTACAAATAGTTAATTTACATAAACATCACATTCAGATCTTGGTTAAATGTTAGTTAGCAAAAAACACATGCTATTATAACTATCAAAGAGACTGTCAATATATACTTGCATGTATGTAATCAAACAACATACAGTATATGTGGTCTTAAAAGTTTTGCAGCCCATCCTCAACCTAACCACACGGTCTACTCTTCACCAGAATGGTAACCCTACAAAACTAACATAACAGAACCCCCTGTCAATCCCAACATAACACAACATTAAACACTAACTTATGTCTCCCTATGTTAATCTTATGCAAAAACACACAAAATAACACTTAATTTCAACATTTATACAGTCTGATGCAAAGCATGCTGGGAATTAGAAATCTGCTGCAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74608 lncRNA downstream 56991 8008451 ~ 8008942 (-) True G65552
TU74549 lncRNA downstream 249026 7816699 ~ 7816907 (-) True G65497
TU74534 lncRNA downstream 257164 7768507 ~ 7808769 (-) True G65482
TU74535 lncRNA downstream 296408 7769118 ~ 7769525 (-) True G65483
TU74490 lncRNA downstream 393816 7667972 ~ 7672117 (-) True G65453
TU74626 lncRNA upstream 12894 8079248 ~ 8079578 (-) True G65570
TU74644 lncRNA upstream 66487 8132841 ~ 8133073 (-) True G65588
TU76289 lncRNA upstream 212116 8278470 ~ 8278673 (-) True G66955
TU76244 lncRNA upstream 221812 8288166 ~ 8290248 (-) False G66915
TU76241 lncRNA upstream 223011 8289365 ~ 8290248 (-) False G66915
CI01000010_08015262_08018732.mRNA mRNA downstream 47146 8013962 ~ 8018787 (-) True CI01000010_08015262_08018732
CI01000010_07953243_07995292.mRNA mRNA downstream 70641 7952912 ~ 7995292 (-) True CI01000010_07953243_07995292
CI01000010_07906951_07944215.mRNA mRNA downstream 121457 7906883 ~ 7944476 (-) True CI01000010_07906951_07944215
CI01000010_07880416_07900104.mRNA mRNA downstream 165829 7880375 ~ 7900104 (-) False CI01000010_07880416_07900104
CI01000010_07784276_07792092.mRNA mRNA downstream 273841 7784276 ~ 7792092 (-) True CI01000010_07784276_07792092
CI01000010_08093640_08128035.mRNA mRNA upstream 27056 8093410 ~ 8128647 (-) True CI01000010_08093640_08128035
CI01000010_08159110_08177308.mRNA mRNA upstream 92746 8159100 ~ 8177308 (-) True CI01000010_08159110_08177308
CI01000010_08187103_08253432.mRNA mRNA upstream 120707 8187061 ~ 8253953 (-) True CI01000010_08187103_08253432
CI01000010_08293951_08338893.mRNA mRNA upstream 227316 8293670 ~ 8338893 (-) True CI01000010_08293951_08338893
CI01000010_08341936_08349855.mRNA mRNA upstream 275005 8341359 ~ 8349880 (-) True CI01000010_08341936_08349855
TU74478 other downstream 167815 7842636 ~ 7873650 (-) True G65441
TU74496 other downstream 393590 7663691 ~ 7672343 (-) False G65453
TU73887 other downstream 1969453 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 2148922 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 2823007 5049155 ~ 5242926 (-) True G64564
TU76444 other upstream 575336 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 3862607 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 3898511 11968202 ~ 11968254 (-) True G67957

Expression Profile