RNA id: CI01000010_08093640_08128035.mRNA



Basic Information


Item Value
RNA id CI01000010_08093640_08128035.mRNA
length 1901
RNA type mRNA
GC content 0.43
exon number 9
gene id CI01000010_08093640_08128035
representative True

Chromosome Information


Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 8093410 ~ 8128647 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTAAAAACCAAGCCCATTACATGTTTAACAGATATTTCTATTTAGAGAGGTATACGTGCCATCTTTACACTTTCACAAGCACTTTTTATAGGCAGCATGGGTCAGGAAAAAAACATGATAATATTAACCATCCATCATTTCTAGCTGCCCTTGTTGACAGTTTGTGAACACATGCAGACTGCAACTTCATGTGCTTTAAATACAGTACAAAACAACAACAGTGTCATCTAGTGGCAGAACATGAACAGTGGTAGAATATCACCTAAATATTTGTAAGCATTTGTGACATTATGTCATTCGATTTTTCTTGAATCATCCTTTATATGAGGTGATAATAATGGCAAGATATATAGCAATATGTCAAATATATTGGGTCATTGGGTGTATGTGATTTTTTTGTTTTTTTTTGTTTTGTTATAATGATTATTTTTAAGATGATTAAATATTTAAGGTTAACTGGTCTGATTAATAGACTTTTATGTTATTTTAGGTACAGTCTTTTTTGTTTATTTATTTAAGGATTTTTTTCCCCTTTTCCTCTACTTTTTGCACCACACTCCTGTCCAGTAGGTGGCAGAAATGCACCTTATGTTAGTGTACCAACCACTACAATGGAAAAGCTGGTGTACTACAGCAAAAATAGCCATTGGCTGGAATCTCTGTGGCGGAATGCTGCCGGGAGCCCCAACCCTCCCCTTGAGTTCACCCTCCCACCCATTAGGAATTCCAACAGGGCATTGTGGTGCATGAGCAGAGACCAGTCGGTGTGTTTTGGTCTCACACCGAGTCAGTGGGTTGCATTCTGTGTGTGGCGCGGGACCCTCGCTCCTCAGGATGCTTTTGTGAGGGCCTCCAAAGAGGCCAAGTTCACAGAGACACAAAAGCGGTGCTTAACCTATAGTGGAGGGCCACTGGCTCCCTTCACAATGGCTTATATCAGCGGTGCACAATACCAGGGTCTCACAGAGGGCAAAAGATGGGCCAGAGATGAGAGCGTGACGGCTACCTCTTCCTTTCTCTCTCCATCCCCATATGCGTTCTCCTTTACGCTGCCTGTCGCTGCTGGTGCTTTTCCACCGGGGCTGGTCTGCTTACGTACAACTAGCACGGTCAAGTATGAAATAGATGTGCTCTTCGAACCCATCACCCCCACCAAACACAAATCCACTGCTCCCCCGAGAGTGTTCCCTGGCAGCTGTCATTACACTAAGACAATCAAATTAAGAAAATTACTTCACTTCAGTGTGAAGAAGGTGGATATATCCAGCTTCAGGTCAAAGGTTTCTCTGACAGAAAGATGGGGTCACGGGGTTTGGCATCTATCACATGTGATCGCATCAGTGACGACAGCCAGGCCAGCAGTTCGCCAAATGCGCATAATTGTCATTGACCAGCGGTGTCATGATTCTTTAAGCTTTGATAGCTGCACACGCACAACCGACCCTGTGTTGGATTGGTTTGCTCAGTGCTACCCACCCCCTCTGCACTGGCACAGAAATGACCAGAAGGCTGTTCTGTTCCGCTTCTGTCCTCCCCCCGCTCTAGAGCAGCATCACGCGCCCATGACGGCAGCATCTTTTACGTCGTGCTCCTCTCCACGAGGGCTTCAGATCAGGTGTGACATGAAATTTATTGAAATAGTGTCACTCAAAGGCACCGATGCTTCATGAGAATGTCATAAAAACCTATTAAAAATCAATTTTTATGGCCCTTTCTAAGAGTCTTTGTGTTTCAGTCCATTAACAATATTCCATCAACCTAGAATAGCACAGAGAATCCATATTTTCAGCTCATGGTTCTGAGTATTTATGTGTGTGTATGTTTTCCAAACATTAGTAAAAATACAATACAGACCTAAGAAACCTCTGACATCAGGGCAACTGGCTAGGCTGCAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74626 lncRNA downstream 13832 8079248 ~ 8079578 (-) True G65570
TU74618 lncRNA downstream 27056 8065933 ~ 8066354 (-) True G65562
TU74608 lncRNA downstream 84468 8008451 ~ 8008942 (-) True G65552
TU74549 lncRNA downstream 276503 7816699 ~ 7816907 (-) True G65497
TU74534 lncRNA downstream 284641 7768507 ~ 7808769 (-) True G65482
TU74644 lncRNA upstream 4194 8132841 ~ 8133073 (-) True G65588
TU76289 lncRNA upstream 149823 8278470 ~ 8278673 (-) True G66955
TU76244 lncRNA upstream 159519 8288166 ~ 8290248 (-) False G66915
TU76241 lncRNA upstream 160718 8289365 ~ 8290248 (-) False G66915
TU76243 lncRNA upstream 160718 8289365 ~ 8290926 (-) False G66915
CI01000010_08015262_08018732.mRNA mRNA downstream 74623 8013962 ~ 8018787 (-) True CI01000010_08015262_08018732
CI01000010_07953243_07995292.mRNA mRNA downstream 98118 7952912 ~ 7995292 (-) True CI01000010_07953243_07995292
CI01000010_07906951_07944215.mRNA mRNA downstream 148934 7906883 ~ 7944476 (-) True CI01000010_07906951_07944215
CI01000010_07880416_07900104.mRNA mRNA downstream 193306 7880375 ~ 7900104 (-) False CI01000010_07880416_07900104
CI01000010_07784276_07792092.mRNA mRNA downstream 301318 7784276 ~ 7792092 (-) True CI01000010_07784276_07792092
CI01000010_08159110_08177308.mRNA mRNA upstream 30453 8159100 ~ 8177308 (-) True CI01000010_08159110_08177308
CI01000010_08187103_08253432.mRNA mRNA upstream 58414 8187061 ~ 8253953 (-) True CI01000010_08187103_08253432
CI01000010_08293951_08338893.mRNA mRNA upstream 165023 8293670 ~ 8338893 (-) True CI01000010_08293951_08338893
CI01000010_08341936_08349855.mRNA mRNA upstream 212712 8341359 ~ 8349880 (-) True CI01000010_08341936_08349855
CI01000010_08381760_08382057.mRNA mRNA upstream 252806 8381453 ~ 8382323 (-) True CI01000010_08381760_08382057
TU74478 other downstream 195292 7842636 ~ 7873650 (-) True G65441
TU74496 other downstream 421067 7663691 ~ 7672343 (-) False G65453
TU73887 other downstream 1996930 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 2176399 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 2850484 5049155 ~ 5242926 (-) True G64564
TU76444 other upstream 513043 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 3800314 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 3836218 11968202 ~ 11968254 (-) True G67957

Expression Profile