RNA id: TU74534


Basic Information

Item Value
RNA id TU74534
length 586
lncRNA type read_through
GC content 0.40
exon number 2
gene id G65482
representative True

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 7768507 ~ 7808769 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCACTGATTCGAAACAAAAGATTCATGAAGCTTCGCATCAGTGGTTCGGATCGTGTATCAAACTGCCAAAGTCACGTGAACCATTAAAATTTCGAAACACTTATGATGTAATGAAGCCTCATTTACTGAAATCACATGACTTTCGCGCTCCGAACCACTGATTCGAAACAAAAGATTCATAAAACTTCGAAGCTTCATGAAGCAGTGTTTTGAAATCGCCCATCACTAGATATTGTTGAAAAGTCGTTTTGTTTTTTTGGCGCACAAAAAGTATTCTCGTCGCTTCATAACATTAAGGTTGAACCACTGTAGTCACATGAACTGTTTTAAATATGTTTTTAGTATCTTTCTGGGCATCTGAAAGTGTTAATTATCTTGCTGGCAATGCAGGCCTCACTGAGCCATCGAATTTAATCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTGAACTTTTGGGTGAACTAACCCTTTAAATTCAATGAAAGTCTTAGGGATGTGCTGGAGGAGACTTTACAGCAGGGGTCTCCAAACTCGGTCCTGAAGGGCCACTGTCCTGCAGAGTTCAGCTCCAACCCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74490 lncRNA downstream 96390 7667972 ~ 7672117 (-) True G65453
TU74494 lncRNA downstream 105011 7659435 ~ 7663496 (-) False G65453
TU74460 lncRNA downstream 138201 7629315 ~ 7630306 (-) True G65427
TU74414 lncRNA downstream 257761 7510234 ~ 7510746 (-) True G65391
TU74270 lncRNA downstream 314487 7447656 ~ 7454020 (-) True G65248
TU74549 lncRNA upstream 7930 7816699 ~ 7816907 (-) True G65497
TU74608 lncRNA upstream 199682 8008451 ~ 8008942 (-) True G65552
TU74618 lncRNA upstream 257164 8065933 ~ 8066354 (-) True G65562
TU74626 lncRNA upstream 270479 8079248 ~ 8079578 (-) True G65570
TU74644 lncRNA upstream 324072 8132841 ~ 8133073 (-) True G65588
CI01000010_07528012_07533124.mRNA mRNA downstream 235383 7527690 ~ 7533124 (-) True CI01000010_07528012_07533124
CI01000010_07503276_07509080.mRNA mRNA downstream 259032 7502899 ~ 7509475 (-) True CI01000010_07503276_07509080
CI01000010_07409069_07441868.mRNA mRNA downstream 326639 7408497 ~ 7441868 (-) True CI01000010_07409069_07441868
CI01000010_07347866_07367517.mRNA mRNA downstream 400718 7347823 ~ 7367789 (-) True CI01000010_07347866_07367517
CI01000010_07342174_07344454.mRNA mRNA downstream 423462 7342174 ~ 7345045 (-) True CI01000010_07342174_07344454
CI01000010_07880416_07900104.mRNA mRNA upstream 71606 7880375 ~ 7900104 (-) False CI01000010_07880416_07900104
CI01000010_07906951_07944215.mRNA mRNA upstream 98114 7906883 ~ 7944476 (-) True CI01000010_07906951_07944215
CI01000010_07953243_07995292.mRNA mRNA upstream 144143 7952912 ~ 7995292 (-) True CI01000010_07953243_07995292
CI01000010_08015262_08018732.mRNA mRNA upstream 205193 8013962 ~ 8018787 (-) True CI01000010_08015262_08018732
CI01000010_08093640_08128035.mRNA mRNA upstream 284641 8093410 ~ 8128647 (-) True CI01000010_08093640_08128035
TU74496 other downstream 96164 7663691 ~ 7672343 (-) False G65453
TU73887 other downstream 1672027 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 1851496 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 2525581 5049155 ~ 5242926 (-) True G64564
TU73132 other downstream 3154951 4613485 ~ 4613556 (-) True G64230
TU74478 other upstream 33867 7842636 ~ 7873650 (-) True G65441
TU76444 other upstream 832921 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 4120192 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 4156096 11968202 ~ 11968254 (-) True G67957

Expression Profile