RNA id: CI01000010_08381760_08382057.mRNA


Basic Information

Item Value
RNA id CI01000010_08381760_08382057.mRNA
length 732
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000010_08381760_08382057
representative True

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 8381453 ~ 8382323 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACAAAAATTCCAATGTAAATGTTTTTTCTTCAGGTTTTTATAATGAGCTGATATCTGTTCACTTGTATGTTTATTGTAAATGCACATGTATATTGTTGTTGTACTGCTGAAGTCACTTTTGATAAAAGCATTTGTAAATGTATGTGACCATGGACTAATCAATAAAAGTCAAAGTTAAAAAACAGATTGACAATCACAAAATGGCCACCAAGTAGAAAAAAAGTTGTCCGATACTGTAATTTAGTCGGATAAATGGATTAGTCTCCATGGAGACGGCAGACGGGAGTTGTAGTATGGAGGTATCGCAGTCTTCACCCAAACAGATGGGCGAACTGACTGTTTTCTCACTGCGGACACTGGCTGAAAGGGATGCTTATGATCCCCGGGTCATGAAGAGACTGTTGGCTGTCTTTGGAGGACACTAAGCGCTTTTTAAAGTCAAACTCTGATTAATAATCTAATAGATGACTGTGAAGCCATCTTGAAACAACAATGAAAGAACCTCACATAGTGTTAACTGACTTGCCTTCATGGGAGCTGGTAAATGTACCAACTGTTCTGGATGCGCTGAGGCTGAGCGTCCTGTTCTTTATATCTTTAACACAGACTCTGACTGTAGAGTAAAACTGCAATAGTAAATAGGAATAATTTGGGGTTTTAAGTGCTTAATGAGAGCATCTAAATGTACAACAAAACACCGAAAACTATCAAAAAGCTCATTATAAAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76303 lncRNA downstream 16244 8364466 ~ 8365209 (-) True G66968
TU76243 lncRNA downstream 90527 8289365 ~ 8290926 (-) False G66915
TU76242 lncRNA downstream 90527 8290347 ~ 8290926 (-) True G66915
TU76244 lncRNA downstream 91205 8288166 ~ 8290248 (-) False G66915
TU76241 lncRNA downstream 91205 8289365 ~ 8290248 (-) False G66915
TU76316 lncRNA upstream 6869 8389192 ~ 8389482 (-) True G66980
TU76320 lncRNA upstream 16196 8398519 ~ 8398740 (-) True G66984
TU76328 lncRNA upstream 22217 8404540 ~ 8406745 (-) True G66992
TU76459 lncRNA upstream 251695 8634018 ~ 8729421 (-) True G67113
TU76511 lncRNA upstream 560269 8942592 ~ 8942826 (-) True G67156
CI01000010_08341936_08349855.mRNA mRNA downstream 31573 8341359 ~ 8349880 (-) True CI01000010_08341936_08349855
CI01000010_08293951_08338893.mRNA mRNA downstream 42560 8293670 ~ 8338893 (-) True CI01000010_08293951_08338893
CI01000010_08187103_08253432.mRNA mRNA downstream 127500 8187061 ~ 8253953 (-) True CI01000010_08187103_08253432
CI01000010_08159110_08177308.mRNA mRNA downstream 204145 8159100 ~ 8177308 (-) True CI01000010_08159110_08177308
CI01000010_08093640_08128035.mRNA mRNA downstream 252806 8093410 ~ 8128647 (-) True CI01000010_08093640_08128035
CI01000010_08586563_08587030.mRNA mRNA upstream 204134 8586457 ~ 8587030 (-) True CI01000010_08586563_08587030
CI01000010_08624504_08629844.mRNA mRNA upstream 242019 8624342 ~ 8629844 (-) True CI01000010_08624504_08629844
CI01000010_08694007_08717153.mRNA mRNA upstream 311668 8693991 ~ 8717153 (-) True CI01000010_08694007_08717153
CI01000010_08725595_08733769.mRNA mRNA upstream 342644 8724967 ~ 8733769 (-) True CI01000010_08725595_08733769
CI01000010_08740418_08742300.mRNA mRNA upstream 357063 8739386 ~ 8742300 (-) True CI01000010_08740418_08742300
TU74478 other downstream 483335 7842636 ~ 7873650 (-) True G65441
TU74496 other downstream 709110 7663691 ~ 7672343 (-) False G65453
TU73887 other downstream 2284973 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 2464442 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 3138527 5049155 ~ 5242926 (-) True G64564
TU76444 other upstream 259367 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 3546638 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 3582542 11968202 ~ 11968254 (-) True G67957

Expression Profile