RNA id: TU174077



Basic Information


Item Value
RNA id TU174077
length 251
lncRNA type intronic
GC content 0.45
exon number 1
gene id G153287
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2848603 ~ 2848853 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTATAAACTAAGCAAGAAATAGTTTACTGGAGATGTAATTAGAAGTGTAAAGTTGTGAATATCTAACCTCCCCAATGCCCTGCTCTACATCTAGCATGAGGAGTGAAACTCCTGAGGGTTTTGTAAAGTGAGTGTCGTGTCAGCACACTGAGGTGGCAGACTGATGGTGTCGAGATGGAGTGAGTTACACCCTTAATGAGGATGAGAGATCAGGGATAGGAACCTGAACGCCCTTTGGCACTGCTGCATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU174076 lncRNA downstream 164 2848204 ~ 2848439 (-) True G153286
TU174075 lncRNA downstream 8942 2839378 ~ 2839661 (-) True G153285
TU174074 lncRNA downstream 12824 2835577 ~ 2835779 (-) True G153284
TU174073 lncRNA downstream 13105 2835272 ~ 2835498 (-) True G153283
TU174072 lncRNA downstream 19140 2829258 ~ 2829463 (-) True G153282
TU174078 lncRNA upstream 514 2849367 ~ 2849586 (-) True G153288
TU174079 lncRNA upstream 1184 2850037 ~ 2850374 (-) True G153289
TU174089 lncRNA upstream 26738 2875591 ~ 2875796 (-) True G153299
TU174126 lncRNA upstream 64079 2912932 ~ 2914231 (-) True G153333
TU174171 lncRNA upstream 200206 3049059 ~ 3049329 (-) True G153373
CI01000029_02764957_02770946.mRNA mRNA downstream 77210 2764957 ~ 2771393 (-) True CI01000029_02764957_02770946
CI01000029_02762066_02762926.mRNA mRNA downstream 84835 2761607 ~ 2763768 (-) True CI01000029_02762066_02762926
CI01000029_02753815_02761288.mRNA mRNA downstream 87076 2753748 ~ 2761527 (-) True CI01000029_02753815_02761288
CI01000029_02742245_02743081.mRNA mRNA downstream 104379 2741953 ~ 2744224 (-) True CI01000029_02742245_02743081
CI01000029_02738375_02739517.mRNA mRNA downstream 108364 2738054 ~ 2740239 (-) True CI01000029_02738375_02739517
CI01000029_02957572_02962601.mRNA mRNA upstream 108574 2957427 ~ 2963354 (-) True CI01000029_02957572_02962601
CI01000029_03382508_03395312.mRNA mRNA upstream 533497 3382350 ~ 3395312 (-) True CI01000029_03382508_03395312
CI01000029_03397097_03444565.mRNA mRNA upstream 547286 3396139 ~ 3444565 (-) True CI01000029_03397097_03444565
CI01000029_03503783_03509429.mRNA mRNA upstream 654810 3503663 ~ 3509429 (-) True CI01000029_03503783_03509429
CI01000029_03534096_03563671.mRNA mRNA upstream 685199 3534052 ~ 3563671 (-) True CI01000029_03534096_03563671
TU173923 other downstream 255801 2592459 ~ 2592802 (-) True G153138
TU173481 other downstream 1554480 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU174756 other upstream 399924 3248777 ~ 3286554 (-) True G153891
TU174823 other upstream 857370 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 1611490 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 2137255 4986108 ~ 4987425 (-) False G154415
TU175314 other upstream 2137332 4986185 ~ 4987425 (-) True G154415

Expression Profile