Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110522820 |
| length | 1298 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | LOC110522820 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21160281 ~ 21162494 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0044424 | obsolete intracellular part | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU429718 | lncRNA | downstream | 184 | 21159143 ~ 21160097 (-) | True | G378055 |
| TU429707 | lncRNA | downstream | 28534 | 21119495 ~ 21131747 (-) | True | G378044 |
| TU429706 | lncRNA | downstream | 47724 | 21111749 ~ 21112557 (-) | True | G378043 |
| TU429685 | lncRNA | downstream | 49835 | 21086727 ~ 21110446 (-) | True | G378025 |
| TU429690 | lncRNA | downstream | 60010 | 21098848 ~ 21100271 (-) | True | G378030 |
| TU429721 | lncRNA | upstream | 2817 | 21165311 ~ 21165667 (-) | True | G378058 |
| TU429722 | lncRNA | upstream | 3237 | 21165731 ~ 21166096 (-) | True | G378059 |
| TU429724 | lncRNA | upstream | 4119 | 21166613 ~ 21166865 (-) | True | G378061 |
| TU429725 | lncRNA | upstream | 4389 | 21166883 ~ 21167087 (-) | True | G378062 |
| TU429737 | lncRNA | upstream | 5221 | 21167715 ~ 21169920 (-) | True | G378065 |
| XM_021602066.2 | mRNA | downstream | 141315 | 21007925 ~ 21018966 (-) | False | LOC110523399 |
| XM_021602056.2 | mRNA | downstream | 309057 | 20843391 ~ 20851224 (-) | False | LOC110523394 |
| XM_021602057.2 | mRNA | downstream | 309057 | 20843391 ~ 20851224 (-) | True | LOC110523394 |
| XR_002473444.2 | mRNA | downstream | 1108439 | 20044243 ~ 20051842 (-) | True | LOC110523392 |
| XM_036977011.1 | mRNA | downstream | 1334747 | 19621025 ~ 19825534 (-) | False | LOC110523381 |
| XM_021602075.2 | mRNA | upstream | 10150 | 21172644 ~ 21175591 (-) | True | LOC110523403 |
| XM_021602072.2 | mRNA | upstream | 13654 | 21176148 ~ 21182979 (-) | False | tpst2 |
| XM_036977029.1 | mRNA | upstream | 16005 | 21178499 ~ 21182983 (-) | True | tpst2 |
| XM_036977028.1 | mRNA | upstream | 21193 | 21183687 ~ 21271783 (-) | True | LOC110522821 |
| XM_036977032.1 | mRNA | upstream | 127672 | 21290166 ~ 21353239 (-) | False | LOC110522822 |
| TU429645 | other | downstream | 130498 | 21029458 ~ 21029783 (-) | True | G377991 |
| TU429442 | other | downstream | 455141 | 20704613 ~ 20705140 (-) | True | G377809 |
| TU429433 | other | downstream | 465573 | 20694096 ~ 20694708 (-) | True | G377800 |
| TU426081 | other | downstream | 2601114 | 18558140 ~ 18559167 (-) | False | G374786 |
| TU426079 | other | downstream | 2601114 | 18558239 ~ 18559167 (-) | True | G374786 |
| TU430076 | other | upstream | 629168 | 21791662 ~ 21791993 (-) | True | G378359 |
| TU431328 | other | upstream | 1014771 | 22177265 ~ 22179313 (-) | True | LOC110523434 |
| TU431801 | other | upstream | 1637206 | 22799700 ~ 22802251 (-) | True | jmy |
| TU432173 | other | upstream | 2384706 | 23547200 ~ 23556543 (-) | True | LOC110522831 |
| TU432634 | other | upstream | 2547304 | 23709798 ~ 23711891 (-) | True | G380610 |
