Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004403 |
| length | 789 |
| RNA type | processed_transcript |
| GC content | 0.49 |
| exon number | 5 |
| gene id | XLOC_002313 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 36662640 ~ 36673388 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009409 | response to cold | biological_process |
| GO:1990542 | mitochondrial transmembrane transport | biological_process |
| GO:0006839 | mitochondrial transport | biological_process |
| GO:1990845 | adaptive thermogenesis | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0031966 | mitochondrial membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0017077 | oxidative phosphorylation uncoupler activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-990708-8 | Predicted to enable oxidative phosphorylation uncoupler activity. Predicted to be involved in adaptive thermogenesis; mitochondrial transmembrane transport; and response to cold. Predicted to act upstream of or within mitochondrial transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including blood; brain; cardiovascular system; pleuroperitoneal region; and ventral mesoderm. Human ortholog(s) of this gene implicated in artery disease (multiple); diabetic neuropathy; end stage renal disease; non-alcoholic fatty liver disease; and obesity. Orthologous to human UCP2 (uncoupling protein 2). |
| ensembl_id | ENSDART00000135686 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004378 | lncRNA | upstream | 281626 | 36201199 ~ 36381043 (+) | False | XLOC_002294 |
| TCONS_00004379 | lncRNA | upstream | 316801 | 36202577 ~ 36345868 (+) | False | XLOC_002294 |
| TCONS_00005924 | lncRNA | upstream | 320216 | 36201184 ~ 36342453 (+) | False | XLOC_002294 |
| TCONS_00004376 | lncRNA | upstream | 437789 | 36201194 ~ 36224880 (+) | False | XLOC_002294 |
| TCONS_00004377 | lncRNA | upstream | 437791 | 36201198 ~ 36224878 (+) | False | XLOC_002294 |
| TCONS_00004409 | lncRNA | downstream | 32806 | 36701840 ~ 36705717 (+) | False | XLOC_002314 |
| TCONS_00004410 | lncRNA | downstream | 36590 | 36705624 ~ 36706847 (+) | True | XLOC_002314 |
| TCONS_00004411 | lncRNA | downstream | 57204 | 36726238 ~ 36733011 (+) | True | XLOC_002315 |
| TCONS_00005926 | lncRNA | downstream | 136002 | 36805036 ~ 37063934 (+) | False | XLOC_002317 |
| TCONS_00005927 | lncRNA | downstream | 136039 | 36805073 ~ 37063934 (+) | False | XLOC_002317 |
| TCONS_00004401 | mRNA | upstream | 5976 | 36650222 ~ 36656693 (+) | True | XLOC_002312 |
| TCONS_00004400 | mRNA | upstream | 198954 | 36458563 ~ 36463715 (+) | True | XLOC_002311 |
| TCONS_00004397 | mRNA | upstream | 206684 | 36439293 ~ 36455985 (+) | False | XLOC_002310 |
| TCONS_00004399 | mRNA | upstream | 206690 | 36441124 ~ 36455979 (+) | True | XLOC_002310 |
| TCONS_00004396 | mRNA | upstream | 306027 | 36354863 ~ 36356642 (+) | True | XLOC_002309 |
| TCONS_00004407 | mRNA | downstream | 26563 | 36695597 ~ 36711701 (+) | False | XLOC_002314 |
| TCONS_00004408 | mRNA | downstream | 26613 | 36695647 ~ 36710620 (+) | False | XLOC_002314 |
| TCONS_00004412 | mRNA | downstream | 72468 | 36741502 ~ 36749651 (+) | False | XLOC_002316 |
| TCONS_00004413 | mRNA | downstream | 72468 | 36741502 ~ 36778514 (+) | True | XLOC_002316 |
| TCONS_00004416 | mRNA | downstream | 414620 | 37083654 ~ 37126561 (+) | False | XLOC_002319 |
| TCONS_00004398 | other | upstream | 219822 | 36439306 ~ 36442847 (+) | False | XLOC_002310 |
| TCONS_00004384 | other | upstream | 374166 | 36287841 ~ 36288503 (+) | True | XLOC_002299 |
| TCONS_00004370 | other | upstream | 502382 | 36158967 ~ 36160287 (+) | False | XLOC_002289 |
| TCONS_00004371 | other | upstream | 502482 | 36159612 ~ 36160187 (+) | True | XLOC_002289 |
| TCONS_00004361 | other | upstream | 1017534 | 35645017 ~ 35645135 (+) | True | XLOC_002283 |
| TCONS_00004415 | other | downstream | 291542 | 36960576 ~ 36960690 (+) | True | XLOC_002318 |
| TCONS_00004421 | other | downstream | 478635 | 37147669 ~ 37147784 (+) | True | XLOC_002321 |
| TCONS_00004438 | other | downstream | 1819674 | 38488708 ~ 38488829 (+) | True | XLOC_002333 |
| TCONS_00004441 | other | downstream | 1879055 | 38548089 ~ 38548205 (+) | True | XLOC_002336 |
| TCONS_00004447 | other | downstream | 2014632 | 38683666 ~ 38683780 (+) | True | XLOC_002342 |
