Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049698 |
| length | 875 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | XLOC_025158 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 14543953 ~ 14561096 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0048793 | pronephros development | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004888 | transmembrane signaling receptor activity | molecular_function |
| id | description |
|---|---|
| ko04630 | JAK-STAT signaling pathway |
| ko04151 | PI3K-Akt signaling pathway |
| ko04060 | Cytokine-cytokine receptor interaction |
| ko04640 | Hematopoietic cell lineage |
| ko05200 | Pathways in cancer |
| ko04050 | Cytokine receptors |
| id | description |
|---|---|
| ZDB-GENE-071116-1 | Predicted to enable transmembrane signaling receptor activity. Acts upstream of or within hemopoiesis and pronephros development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including digestive system; hematopoietic cell; hematopoietic system; kidney; and lateral plate mesoderm. Human ortholog(s) of this gene implicated in anemia; familial erythrocytosis 1; high grade glioma; polycythemia; and systemic lupus erythematosus. Orthologous to human EPOR (erythropoietin receptor). |
| ensembl_id | ENSDART00000143904 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052622 | lncRNA | upstream | 270347 | 14277650 ~ 14287841 (+) | True | XLOC_025151 |
| TCONS_00052331 | lncRNA | upstream | 303423 | 14251244 ~ 14254765 (+) | True | XLOC_025149 |
| TCONS_00052330 | lncRNA | upstream | 309650 | 14244198 ~ 14248538 (+) | False | XLOC_025148 |
| TCONS_00049683 | lncRNA | upstream | 310038 | 14242119 ~ 14248150 (+) | False | XLOC_025148 |
| TCONS_00052329 | lncRNA | upstream | 355669 | 14201043 ~ 14202519 (+) | True | XLOC_025147 |
| TCONS_00052623 | lncRNA | downstream | 668856 | 15229952 ~ 15231838 (+) | True | XLOC_025164 |
| TCONS_00052624 | lncRNA | downstream | 710850 | 15271946 ~ 15272293 (+) | False | XLOC_025165 |
| TCONS_00049715 | lncRNA | downstream | 944088 | 15505184 ~ 15506157 (+) | False | XLOC_025169 |
| TCONS_00049716 | lncRNA | downstream | 944181 | 15505277 ~ 15506157 (+) | True | XLOC_025169 |
| TCONS_00052332 | lncRNA | downstream | 956456 | 15517552 ~ 15517899 (+) | True | XLOC_025170 |
| TCONS_00049696 | mRNA | upstream | 20612 | 14512670 ~ 14537576 (+) | True | XLOC_025157 |
| TCONS_00049692 | mRNA | upstream | 49427 | 14499075 ~ 14508761 (+) | False | XLOC_025156 |
| TCONS_00049699 | mRNA | downstream | 10717 | 14571813 ~ 14606118 (+) | False | XLOC_025159 |
| TCONS_00049700 | mRNA | downstream | 10743 | 14571839 ~ 14581210 (+) | False | XLOC_025159 |
| TCONS_00049701 | mRNA | downstream | 20547 | 14581643 ~ 14605846 (+) | True | XLOC_025159 |
| TCONS_00049702 | mRNA | downstream | 50203 | 14611299 ~ 14638399 (+) | True | XLOC_025160 |
| TCONS_00049703 | mRNA | downstream | 80866 | 14641962 ~ 14688110 (+) | False | XLOC_025161 |
| TCONS_00049690 | other | upstream | 158536 | 14399225 ~ 14399652 (+) | True | XLOC_025154 |
| TCONS_00049684 | other | upstream | 313404 | 14244666 ~ 14244784 (+) | True | XLOC_025148 |
| TCONS_00049675 | other | upstream | 700472 | 13848226 ~ 13857716 (+) | False | XLOC_025143 |
| TCONS_00049661 | other | upstream | 1151650 | 13406451 ~ 13406538 (+) | False | XLOC_025131 |
| TCONS_00049660 | other | upstream | 1151865 | 13406226 ~ 13406323 (+) | True | XLOC_025130 |
| TCONS_00049704 | other | downstream | 113673 | 14674769 ~ 14684603 (+) | True | XLOC_025161 |
| TCONS_00049719 | other | downstream | 1130207 | 15691303 ~ 15719823 (+) | True | XLOC_025174 |
| TCONS_00049721 | other | downstream | 1194627 | 15755723 ~ 15774178 (+) | False | XLOC_025176 |
| TCONS_00049736 | other | downstream | 1811916 | 16373012 ~ 16373127 (+) | True | XLOC_025188 |
| TCONS_00049741 | other | downstream | 2008169 | 16569265 ~ 16588629 (+) | True | XLOC_025190 |
