Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049741 |
| length | 762 |
| RNA type | processed_transcript |
| GC content | 0.46 |
| exon number | 2 |
| gene id | XLOC_025190 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 16566361 ~ 16591648 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006810 | transport | biological_process |
| GO:0035725 | sodium ion transmembrane transport | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015293 | symporter activity | molecular_function |
| GO:0005328 | neurotransmitter | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-061009-43 | Predicted to enable symporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human SLC6A16 (solute carrier family 6 member 16). |
| ensembl_id | ENSDART00000131221 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052631 | lncRNA | upstream | 327925 | 16186593 ~ 16241340 (+) | True | XLOC_025185 |
| TCONS_00049734 | lncRNA | upstream | 336983 | 16229927 ~ 16232282 (+) | True | XLOC_025186 |
| TCONS_00052630 | lncRNA | upstream | 407806 | 16153224 ~ 16161459 (+) | True | XLOC_025184 |
| TCONS_00049732 | lncRNA | upstream | 513533 | 16055009 ~ 16055732 (+) | True | XLOC_025183 |
| TCONS_00052333 | lncRNA | upstream | 702863 | 15865921 ~ 15866402 (+) | True | XLOC_025180 |
| TCONS_00049755 | lncRNA | downstream | 285772 | 16874401 ~ 16876258 (+) | False | XLOC_025197 |
| TCONS_00052632 | lncRNA | downstream | 286865 | 16875494 ~ 16877696 (+) | False | XLOC_025197 |
| TCONS_00052633 | lncRNA | downstream | 287128 | 16875757 ~ 16883304 (+) | True | XLOC_025197 |
| TCONS_00049777 | lncRNA | downstream | 1065175 | 17653804 ~ 17655452 (+) | False | XLOC_025207 |
| TCONS_00049802 | lncRNA | downstream | 1417482 | 18006111 ~ 18008388 (+) | True | XLOC_025214 |
| TCONS_00049737 | mRNA | upstream | 111247 | 16449490 ~ 16458018 (+) | False | XLOC_025189 |
| TCONS_00049738 | mRNA | upstream | 112251 | 16455749 ~ 16457014 (+) | True | XLOC_025189 |
| TCONS_00049735 | mRNA | upstream | 284006 | 16265924 ~ 16285259 (+) | True | XLOC_025187 |
| TCONS_00049733 | mRNA | upstream | 336823 | 16229911 ~ 16232442 (+) | False | XLOC_025186 |
| TCONS_00049730 | mRNA | upstream | 580537 | 15907297 ~ 15988728 (+) | False | XLOC_025182 |
| TCONS_00049742 | mRNA | downstream | 23945 | 16612574 ~ 16654088 (+) | True | XLOC_025191 |
| TCONS_00049743 | mRNA | downstream | 73580 | 16662209 ~ 16683623 (+) | False | XLOC_025192 |
| TCONS_00049744 | mRNA | downstream | 74744 | 16663373 ~ 16679457 (+) | False | XLOC_025192 |
| TCONS_00049745 | mRNA | downstream | 75583 | 16664212 ~ 16679971 (+) | False | XLOC_025192 |
| TCONS_00049747 | mRNA | downstream | 79980 | 16668609 ~ 16678678 (+) | True | XLOC_025192 |
| TCONS_00049736 | other | upstream | 196138 | 16373012 ~ 16373127 (+) | True | XLOC_025188 |
| TCONS_00049721 | other | upstream | 795087 | 15755723 ~ 15774178 (+) | False | XLOC_025176 |
| TCONS_00049719 | other | upstream | 849442 | 15691303 ~ 15719823 (+) | True | XLOC_025174 |
| TCONS_00049704 | other | upstream | 1884662 | 14674769 ~ 14684603 (+) | True | XLOC_025161 |
| TCONS_00049690 | other | upstream | 2169613 | 14399225 ~ 14399652 (+) | True | XLOC_025154 |
| TCONS_00049746 | other | downstream | 79974 | 16668603 ~ 16678650 (+) | False | XLOC_025192 |
| TCONS_00049749 | other | downstream | 135985 | 16724614 ~ 16729015 (+) | False | XLOC_025193 |
| TCONS_00049766 | other | downstream | 806610 | 17395239 ~ 17461885 (+) | True | XLOC_025203 |
| TCONS_00049769 | other | downstream | 883518 | 17472147 ~ 17522927 (+) | True | XLOC_025202 |
| TCONS_00049790 | other | downstream | 1289863 | 17878492 ~ 17897852 (+) | True | XLOC_025211 |
