Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051761 |
| length | 743 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | XLOC_026573 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 34174004 ~ 34180464 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040724-124 | Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in late endosome membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human YIPF2 (Yip1 domain family member 2). |
| ensembl_id | ENSDART00000151819 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00053066 | lncRNA | downstream | 35866 | 34139637 ~ 34141181 (-) | True | XLOC_026572 |
| TCONS_00051677 | lncRNA | downstream | 238226 | 33936453 ~ 33938821 (-) | True | XLOC_026512 |
| TCONS_00051675 | lncRNA | downstream | 241609 | 33922620 ~ 33935438 (-) | False | XLOC_026512 |
| TCONS_00053065 | lncRNA | downstream | 257852 | 33918566 ~ 33919195 (-) | True | XLOC_026511 |
| TCONS_00051667 | lncRNA | downstream | 486293 | 33681518 ~ 33690754 (-) | True | XLOC_026509 |
| TCONS_00051771 | lncRNA | upstream | 289790 | 34470154 ~ 34477363 (-) | False | XLOC_026575 |
| TCONS_00051773 | lncRNA | upstream | 345578 | 34525942 ~ 34546406 (-) | False | XLOC_026575 |
| TCONS_00051776 | lncRNA | upstream | 411553 | 34591917 ~ 34593056 (-) | True | XLOC_026576 |
| TCONS_00052476 | lncRNA | upstream | 460684 | 34641048 ~ 34641973 (-) | True | XLOC_026580 |
| TCONS_00052477 | lncRNA | upstream | 473223 | 34653587 ~ 34655108 (-) | True | XLOC_026581 |
| TCONS_00051757 | mRNA | downstream | 40269 | 34129505 ~ 34136778 (-) | False | XLOC_026571 |
| TCONS_00051758 | mRNA | downstream | 40675 | 34129513 ~ 34136372 (-) | False | XLOC_026571 |
| TCONS_00051759 | mRNA | downstream | 40679 | 34131872 ~ 34136368 (-) | True | XLOC_026571 |
| TCONS_00051756 | mRNA | downstream | 61161 | 34115438 ~ 34115886 (-) | True | XLOC_026570 |
| TCONS_00051755 | mRNA | downstream | 63209 | 34113410 ~ 34113838 (-) | True | XLOC_026569 |
| TCONS_00051764 | mRNA | upstream | 78391 | 34258755 ~ 34337969 (-) | False | XLOC_026574 |
| TCONS_00051765 | mRNA | upstream | 84685 | 34265049 ~ 34279109 (-) | False | XLOC_026574 |
| TCONS_00051767 | mRNA | upstream | 84685 | 34265049 ~ 34296361 (-) | False | XLOC_026574 |
| TCONS_00051766 | mRNA | upstream | 84685 | 34265049 ~ 34296361 (-) | True | XLOC_026574 |
| TCONS_00051768 | mRNA | upstream | 271972 | 34452336 ~ 34547000 (-) | False | XLOC_026575 |
| TCONS_00051752 | other | downstream | 73682 | 34102957 ~ 34103365 (-) | True | XLOC_026563 |
| TCONS_00051740 | other | downstream | 90564 | 34086041 ~ 34086483 (-) | True | XLOC_026558 |
| TCONS_00051725 | other | downstream | 112111 | 34063955 ~ 34064936 (-) | True | XLOC_026547 |
| TCONS_00051722 | other | downstream | 118330 | 34058679 ~ 34058717 (-) | True | XLOC_026544 |
| TCONS_00051716 | other | downstream | 128394 | 34048205 ~ 34048653 (-) | True | XLOC_026539 |
| TCONS_00051772 | other | upstream | 345578 | 34525942 ~ 34546399 (-) | False | XLOC_026575 |
| TCONS_00051781 | other | upstream | 471946 | 34652310 ~ 34656737 (-) | False | XLOC_026581 |
| TCONS_00051782 | other | upstream | 472608 | 34652972 ~ 34654998 (-) | False | XLOC_026581 |
| TCONS_00051787 | other | upstream | 563215 | 34743579 ~ 34753541 (-) | True | XLOC_026582 |
| TCONS_00051789 | other | upstream | 587177 | 34767541 ~ 34775954 (-) | False | XLOC_026583 |
