RNA id: TU2321668


Basic Information

Item Value
RNA id TU2321668
length 537
RNA type TUCP
GC content 0.51
exon number 1
gene id G2029844
representative True

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40507746 ~ 40508282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TACAGAACACATATGTTTAAAACGTATGGACTATAATGATGTAGTAATGACAGACAATTAGTAACAACTTCATTAGACTATGCCTACAAGGTGTAAATTAAGGTAAGGAAGGTGCTGGTGACTGTCTCATAAGGGATAAGTGATAATAGATAGAGCCATGGCCTACCCTTTGAGGacgtctgtccctcctcccctccgcTTGGCCCGGCTGGCTCTGGGTTGGGTCGGAGTCTGCCTGGCCGGCTCGCTGTCTACAGTTAATAACGGCAAAGACACCAGCTCGCCTTCGGTAAGTCTAGCTTCTCCTCCGGTTCCCCCAGCCTGCTCAGCCTCAGCCCCGCCAGGCTCCGTCCACAGCGAAAGGACCGCGACCAGACCCACCGCCAGCCTCACCAGCCGCCCCCGACACATTGCCACAGGCCTGGTGATCTTCTCACAAGTTCACAATATCTCCACTTTTTGGTCAAAAAAACTGTTGTATTTTCGGTTTTAAGTCGCGCTTCTCCTAAATCCAACGGGGCTCAGGGAAATAGTCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2321670 lncRNA downstream 388 40500752 ~ 40507358 (-) True G2029845
TU2321611 lncRNA downstream 22300 40396688 ~ 40485446 (-) False G2029800
TU2321610 lncRNA downstream 22300 40483169 ~ 40485446 (-) True G2029800
TU2321614 lncRNA downstream 32376 40394411 ~ 40475370 (-) True G2029802
TU2321650 lncRNA downstream 44889 40458567 ~ 40462857 (-) True G2029826
TU2321676 lncRNA upstream 6518 40514800 ~ 40532196 (-) True G2029850
TU2321680 lncRNA upstream 31658 40539940 ~ 40540224 (-) True G2029854
TU2321682 lncRNA upstream 33280 40541562 ~ 40541878 (-) True G2029856
TU2321683 lncRNA upstream 40040 40548322 ~ 40548577 (-) True G2029857
TU2321686 lncRNA upstream 57452 40565734 ~ 40566812 (-) True G2029858
XM_036963650.1 mRNA downstream 141799 40335544 ~ 40365947 (-) True LOC110519217
XM_036963648.1 mRNA downstream 199835 40296124 ~ 40307911 (-) False LOC110506134
XM_036963649.1 mRNA downstream 199835 40296124 ~ 40307911 (-) False LOC110506134
XM_036964132.1 mRNA downstream 237894 40213412 ~ 40269852 (-) False LOC110506132
XM_036964133.1 mRNA downstream 239083 40213412 ~ 40268663 (-) False LOC110506132
XM_036963536.1 mRNA upstream 155236 40663518 ~ 40666752 (-) False dut
XM_036963537.1 mRNA upstream 155236 40663518 ~ 40667842 (-) True dut
XM_036963880.1 mRNA upstream 172139 40680421 ~ 40736226 (-) True LOC110506139
XM_036963288.1 mRNA upstream 295821 40804103 ~ 40832292 (-) True LOC110519157
XM_036963625.1 mRNA upstream 363150 40871432 ~ 40872675 (-) False LOC118944423
TU2321323 other downstream 237971 40267249 ~ 40269775 (-) True LOC110506132
TU2321319 other downstream 306931 40198816 ~ 40200815 (-) True pldn
TU2320355 other downstream 1276936 39229129 ~ 39230810 (-) False G2028779
TU2320356 other downstream 1277232 39229129 ~ 39230514 (-) False G2028779
TU2320352 other downstream 1280687 39226363 ~ 39227059 (-) True G2028777
TU2321690 other upstream 42897 40551179 ~ 40567512 (-) False G2029858
TU2321988 other upstream 267432 40775714 ~ 40778988 (-) True G2030106
TU2322044 other upstream 379321 40887603 ~ 40888684 (-) True G2030157
TU2322050 other upstream 390188 40898470 ~ 40899021 (-) True G2030162
TU2322043 other upstream 398341 40906623 ~ 40907193 (-) True G2030156

Expression Profile