Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007220 |
| length | 1421 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 11 |
| gene id | XLOC_003742 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 44617021 ~ 44637842 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-77 | Predicted to enable RNA binding activity. Orthologous to human RBM34 (RNA binding motif protein 34). |
| ensembl_id | ENSDART00000187753 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008435 | lncRNA | upstream | 20545 | 44601299 ~ 44601938 (+) | True | XLOC_003741 |
| TCONS_00008708 | lncRNA | upstream | 34562 | 44585414 ~ 44587921 (+) | False | XLOC_003741 |
| TCONS_00008707 | lncRNA | upstream | 79485 | 44539504 ~ 44542998 (+) | True | XLOC_003740 |
| TCONS_00008706 | lncRNA | upstream | 172120 | 44447688 ~ 44450363 (+) | True | XLOC_003738 |
| TCONS_00008434 | lncRNA | upstream | 226320 | 44395417 ~ 44396163 (+) | True | XLOC_003737 |
| TCONS_00008709 | lncRNA | downstream | 41445 | 44676506 ~ 44752657 (+) | False | XLOC_003743 |
| TCONS_00008710 | lncRNA | downstream | 41472 | 44676533 ~ 44752657 (+) | False | XLOC_003743 |
| TCONS_00008711 | lncRNA | downstream | 41499 | 44676560 ~ 44694038 (+) | True | XLOC_003743 |
| TCONS_00008712 | lncRNA | downstream | 157442 | 44792503 ~ 44803305 (+) | True | XLOC_003745 |
| TCONS_00008713 | lncRNA | downstream | 272908 | 44907969 ~ 44911219 (+) | False | XLOC_003748 |
| TCONS_00007213 | mRNA | upstream | 18694 | 44548209 ~ 44603789 (+) | False | XLOC_003741 |
| TCONS_00007212 | mRNA | upstream | 18694 | 44548209 ~ 44603789 (+) | False | XLOC_003741 |
| TCONS_00007211 | mRNA | upstream | 18694 | 44548209 ~ 44603789 (+) | False | XLOC_003741 |
| TCONS_00007214 | mRNA | upstream | 18854 | 44562724 ~ 44603629 (+) | False | XLOC_003741 |
| TCONS_00007215 | mRNA | upstream | 19360 | 44579865 ~ 44603123 (+) | False | XLOC_003741 |
| TCONS_00007221 | mRNA | downstream | 87958 | 44723019 ~ 44726288 (+) | True | XLOC_003744 |
| TCONS_00007222 | mRNA | downstream | 169624 | 44804685 ~ 44855209 (+) | True | XLOC_003746 |
| TCONS_00007224 | mRNA | downstream | 297791 | 44932852 ~ 44936320 (+) | True | XLOC_003749 |
| TCONS_00007225 | mRNA | downstream | 457805 | 45092866 ~ 45107913 (+) | True | XLOC_003750 |
| TCONS_00007226 | mRNA | downstream | 475804 | 45110865 ~ 45126501 (+) | True | XLOC_003751 |
| TCONS_00007206 | other | upstream | 286703 | 44335666 ~ 44335780 (+) | True | XLOC_003733 |
| TCONS_00007205 | other | upstream | 287161 | 44328774 ~ 44335322 (+) | True | XLOC_003732 |
| TCONS_00007204 | other | upstream | 287572 | 44324761 ~ 44334911 (+) | False | XLOC_003732 |
| TCONS_00007203 | other | upstream | 296191 | 44324761 ~ 44326292 (+) | False | XLOC_003732 |
| TCONS_00007198 | other | upstream | 597605 | 44024762 ~ 44024878 (+) | True | XLOC_003725 |
| TCONS_00007223 | other | downstream | 216413 | 44851474 ~ 44851593 (+) | True | XLOC_003747 |
| TCONS_00007247 | other | downstream | 753137 | 45388198 ~ 45393530 (+) | False | XLOC_003764 |
| TCONS_00007249 | other | downstream | 753149 | 45388210 ~ 45392663 (+) | False | XLOC_003764 |
| TCONS_00007251 | other | downstream | 757150 | 45392211 ~ 45394780 (+) | False | XLOC_003764 |
