RNA id: TU91286


Basic Information

Item Value
RNA id TU91286
length 332
lncRNA type read_through
GC content 0.42
exon number 3
gene id anxa1a
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41135777 ~ 41270849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctttgtttgtggCTGCCATGACGATGTTTAGCAAACATTAAGATTAACGAAGAAGTTTTTCCCTTGTCTTACCTCCGTTTGCTTCGGGACAGGCTTAGCTTTTTACTCTTTTTAGATGTTCACATCTGGAGCTGGAAGAGCAGCTGATCCCAGTGCAGCTGCTGACATCTGTAAACACATCTAATCATGTGCCAATCATCTTTCTCTGAAGGAGCTCCGTCAACgtgcaaaataaaagcttttattttgaagggtaaaaaaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91270 lncRNA upstream 38280 41132183 ~ 41141445 (+) True G68332
TU91269 lncRNA upstream 47182 41132183 ~ 41132543 (+) False G68332
TU91268 lncRNA upstream 84507 41094858 ~ 41095218 (+) False LOC120561096
TU91237 lncRNA upstream 109076 41061839 ~ 41070649 (+) False G68309
TU91259 lncRNA upstream 136546 41039582 ~ 41043179 (+) True G68324
TU91312 lncRNA downstream 95735 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA downstream 95735 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA downstream 108592 41379441 ~ 41400573 (+) True G68349
TU91306 lncRNA downstream 109919 41380768 ~ 41400573 (+) False G68349
TU91329 lncRNA downstream 150090 41420939 ~ 41484804 (+) True G68356
XM_039804052.1 mRNA upstream 81929 41081607 ~ 41097796 (+) True LOC120561096
XM_039802430.1 mRNA upstream 108819 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA upstream 108819 41054751 ~ 41070906 (+) True rorb
XM_039802428.1 mRNA upstream 232916 40891729 ~ 40946809 (+) True trpm6
XM_039802427.1 mRNA upstream 296166 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039802520.1 mRNA downstream 327378 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 339083 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 359887 41630736 ~ 41635889 (+) True LOC120560213
XM_039802487.1 mRNA downstream 370481 41641330 ~ 41654650 (+) True LOC120560214
XM_039802489.1 mRNA downstream 428513 41699362 ~ 41702500 (+) True LOC120560215
TU91239 other upstream 140987 41024999 ~ 41038738 (+) True G68309
TU91230 other upstream 229747 40944533 ~ 40949978 (+) False trpm6
TU91231 other upstream 229747 40949520 ~ 40949978 (+) False trpm6
TU91208 other upstream 282617 40867247 ~ 40897108 (+) True G68285
TU91093 other upstream 797275 40379417 ~ 40382450 (+) False tmem230b
TU91319 other downstream 95735 41366584 ~ 41400573 (+) False G68349
TU91431 other downstream 450164 41721013 ~ 41756128 (+) False aebp1b
TU91472 other downstream 638975 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 661714 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other downstream 661714 41932563 ~ 41934316 (+) False LOC120561105

Expression Profile