RNA id: TU91470


Basic Information

Item Value
RNA id TU91470
length 518
lncRNA type intronic
GC content 0.42
exon number 3
gene id G68427
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41902901 ~ 41903590 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tttatctaaacccaactgtcctgttcttctttatctaaacccaactgtcctgttcttctttatctaaacccaactgtcctgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtccgttcttctttacctaaacccaactgtcctgttcttcttttcctaaactcaaactgtcctgttcttctttatctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccattcttctttatctaaacccaactgtcccgttcttctttacctaaacccaaccgtcccgtt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91463 lncRNA upstream 4472 41897926 ~ 41898429 (+) True G68426
TU91348 lncRNA upstream 54333 41795408 ~ 41848568 (+) False G68359
TU91335 lncRNA upstream 73232 41774852 ~ 41829669 (+) False G68359
TU91347 lncRNA upstream 73232 41775045 ~ 41829669 (+) False G68359
TU91441 lncRNA upstream 97824 41767117 ~ 41805077 (+) True G68411
TU91361 lncRNA downstream 25064 41928654 ~ 41929141 (+) True G68369
TU91352 lncRNA downstream 31857 41935447 ~ 41939058 (+) True LOC120561105
TU91485 lncRNA downstream 40106 41943696 ~ 42008298 (+) False G68433
TU91487 lncRNA downstream 40106 41943696 ~ 42008298 (+) False G68433
TU91489 lncRNA downstream 40106 41943696 ~ 41953714 (+) False G68433
XM_039804055.1 mRNA upstream 109990 41720800 ~ 41792911 (+) True aebp1b
XM_039802491.1 mRNA upstream 191695 41707504 ~ 41711206 (+) True LOC120560218
XM_039802489.1 mRNA upstream 200401 41699362 ~ 41702500 (+) True LOC120560215
XM_039802487.1 mRNA upstream 248251 41641330 ~ 41654650 (+) True LOC120560214
XM_039802486.1 mRNA upstream 267012 41630736 ~ 41635889 (+) True LOC120560213
XM_039804058.1 mRNA downstream 29267 41932857 ~ 41938290 (+) False LOC120561105
XM_039804061.1 mRNA downstream 149831 42053421 ~ 42070713 (+) True LOC120561109
XM_039802517.1 mRNA downstream 236993 42140583 ~ 42147455 (+) True LOC120560236
XM_039802512.1 mRNA downstream 247041 42150631 ~ 42158948 (+) True LOC120560233
XM_039802435.1 mRNA downstream 314572 42218162 ~ 42240929 (+) True LOC120560192
TU91431 other upstream 146773 41721013 ~ 41756128 (+) False aebp1b
TU91319 other upstream 502328 41366584 ~ 41400573 (+) False G68349
TU91301 other upstream 635427 41266726 ~ 41267474 (+) False LOC120561097
TU91281 other upstream 640551 41207784 ~ 41262350 (+) False anxa1a
TU91472 other downstream 6234 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 28973 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other downstream 28973 41932563 ~ 41934316 (+) False LOC120561105
TU91611 other downstream 418883 42322473 ~ 42396643 (+) True G68504
TU91750 other downstream 1060450 42964040 ~ 42965620 (+) False G68598

Expression Profile