Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU353424 |
| length | 207 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC113524711 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 19429191 ~ 19451604 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU353419 | lncRNA | downstream | 15257 | 19409824 ~ 19413934 (-) | True | G298449 |
| TU353336 | lncRNA | downstream | 103484 | 19325497 ~ 19325707 (-) | True | G298400 |
| TU353288 | lncRNA | downstream | 202506 | 19226399 ~ 19226685 (-) | True | G298358 |
| TU353275 | lncRNA | downstream | 209510 | 19219117 ~ 19219681 (-) | True | G298350 |
| TU353274 | lncRNA | downstream | 211952 | 19216638 ~ 19217239 (-) | True | G298349 |
| TU353414 | lncRNA | upstream | 88781 | 19518847 ~ 19542761 (-) | False | G298444 |
| XR_004580095.1 | lncRNA | upstream | 396927 | 19826993 ~ 19827924 (-) | True | LOC117599713 |
| TU353600 | lncRNA | upstream | 523878 | 19953944 ~ 19954298 (-) | True | G298549 |
| XR_004580094.1 | lncRNA | upstream | 752992 | 20183058 ~ 20183574 (-) | True | LOC117599712 |
| XR_004580091.1 | lncRNA | upstream | 760017 | 20190083 ~ 20190644 (-) | True | LOC117599709 |
| XM_034313579.1 | mRNA | downstream | 15265 | 19411881 ~ 19413926 (-) | False | LOC117599702 |
| XM_034313563.1 | mRNA | downstream | 18817 | 19374773 ~ 19410374 (-) | False | LOC113525604 |
| XM_034313566.1 | mRNA | downstream | 18817 | 19374773 ~ 19410374 (-) | False | LOC113525604 |
| XM_034313560.1 | mRNA | downstream | 18817 | 19374773 ~ 19410374 (-) | False | LOC113525604 |
| XM_034313567.1 | mRNA | downstream | 18817 | 19374773 ~ 19410374 (-) | False | LOC113525604 |
| XM_034313557.1 | mRNA | upstream | 18276 | 19448342 ~ 19451604 (-) | False | LOC113524711 |
| XM_026910035.2 | mRNA | upstream | 53823 | 19483889 ~ 19520280 (-) | False | LOC113523941 |
| XM_034313559.1 | mRNA | upstream | 53823 | 19483889 ~ 19519464 (-) | True | LOC113523941 |
| XM_026910049.2 | mRNA | upstream | 111439 | 19541505 ~ 19542746 (-) | True | LOC113523951 |
| XM_026910048.2 | mRNA | upstream | 136876 | 19566942 ~ 19568441 (-) | False | LOC113523950 |
| TU353415 | other | downstream | 37704 | 19390999 ~ 19391487 (-) | False | LOC113525604 |
| LOC113547697 | other | downstream | 162182 | 19265827 ~ 19267009 (-) | True | LOC113547697 |
| TU353207 | other | downstream | 345726 | 19078004 ~ 19083465 (-) | False | ubr7 |
| XR_003404857.2 | other | downstream | 1323198 | 18075362 ~ 18105993 (-) | False | dpf3 |
| TU352481 | other | downstream | 1713947 | 17707286 ~ 17715244 (-) | False | acot20 |
| XR_004580086.1 | other | upstream | 18327 | 19448393 ~ 19451604 (-) | False | LOC113524711 |
| LOC113524722 | other | upstream | 41954 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
| TU353447 | other | upstream | 160893 | 19590959 ~ 19591437 (-) | True | G298475 |
| XR_004580096.1 | other | upstream | 281581 | 19711647 ~ 19712051 (-) | True | LOC117599714 |
| TU353574 | other | upstream | 454094 | 19884160 ~ 19940999 (-) | False | G298543 |
