Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213983 |
| length | 833 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G180793 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 13094163 ~ 13176020 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213800 | lncRNA | downstream | 45463 | 12989773 ~ 13048700 (-) | True | G180628 |
| TU213798 | lncRNA | downstream | 106640 | 12986787 ~ 12987523 (-) | True | G180627 |
| TU213802 | lncRNA | downstream | 110050 | 12982012 ~ 12984113 (-) | True | G180629 |
| TU213797 | lncRNA | downstream | 113468 | 12976587 ~ 12980695 (-) | True | G180626 |
| TU213731 | lncRNA | downstream | 212252 | 12881655 ~ 12881911 (-) | True | G180574 |
| TU214014 | lncRNA | upstream | 75398 | 13251418 ~ 13272942 (-) | True | G180819 |
| TU214092 | lncRNA | upstream | 250711 | 13426731 ~ 13430173 (-) | True | G180877 |
| TU214294 | lncRNA | upstream | 334431 | 13510451 ~ 13521721 (-) | True | G181047 |
| TU214285 | lncRNA | upstream | 370936 | 13546956 ~ 13570169 (-) | False | ptprsa |
| TU214309 | lncRNA | upstream | 542303 | 13718323 ~ 13719757 (-) | True | G181062 |
| XM_026930682.2 | mRNA | downstream | 47315 | 13037990 ~ 13046848 (-) | False | lpl |
| XM_034308865.1 | mRNA | downstream | 47315 | 13041002 ~ 13046848 (-) | False | lpl |
| XM_026930681.2 | mRNA | downstream | 47316 | 13037990 ~ 13046847 (-) | True | lpl |
| XM_026930799.2 | mRNA | downstream | 61619 | 13024401 ~ 13032544 (-) | True | LOC113536692 |
| XM_026930882.2 | mRNA | downstream | 147343 | 12943426 ~ 12946820 (-) | True | fam32a |
| XM_034308980.1 | mRNA | upstream | 63703 | 13239723 ~ 13243200 (-) | True | rpp21 |
| XM_026924707.2 | mRNA | upstream | 110612 | 13286632 ~ 13302366 (-) | True | pak2b |
| XM_026947751.2 | mRNA | upstream | 127481 | 13303501 ~ 13308317 (-) | True | pigx |
| XM_026927657.2 | mRNA | upstream | 134759 | 13310779 ~ 13317595 (-) | False | ing5a |
| XM_026927665.2 | mRNA | upstream | 134759 | 13310779 ~ 13317419 (-) | True | ing5a |
| TU213621 | other | downstream | 373687 | 12717361 ~ 12720476 (-) | True | G180485 |
| TU212758 | other | downstream | 1590201 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU212749 | other | downstream | 1678723 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212647 | other | downstream | 1847858 | 11243975 ~ 11246305 (-) | False | nppc |
| TU211855 | other | downstream | 3278938 | 9813892 ~ 9815225 (-) | True | G179035 |
| trnam-cau_27 | other | upstream | 60383 | 13236403 ~ 13236475 (-) | True | trnam-cau_27 |
| TU214009 | other | upstream | 63729 | 13239749 ~ 13243162 (-) | False | rpp21 |
| TU214564 | other | upstream | 1184916 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| XR_004579086.1 | other | upstream | 1232706 | 14408726 ~ 14415069 (-) | False | rx1 |
| XR_003402957.2 | other | upstream | 1263834 | 14439854 ~ 14460337 (-) | False | zfr2 |
