Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026918311.2 |
| length | 804 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | lyrm2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 5733660 ~ 5736263 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU484955 | lncRNA | upstream | 128076 | 5605371 ~ 5605584 (+) | True | G408531 |
| TU484795 | lncRNA | upstream | 327609 | 5403467 ~ 5406051 (+) | True | G408378 |
| TU484793 | lncRNA | upstream | 331375 | 5401931 ~ 5402285 (+) | True | G408376 |
| TU484786 | lncRNA | upstream | 355726 | 5376056 ~ 5377934 (+) | True | G408369 |
| TU484780 | lncRNA | upstream | 358592 | 5356138 ~ 5375068 (+) | True | G408364 |
| TU485168 | lncRNA | downstream | 153250 | 5889513 ~ 5889799 (+) | True | G408711 |
| TU485271 | lncRNA | downstream | 312303 | 6048566 ~ 6066515 (+) | True | G408805 |
| TU485288 | lncRNA | downstream | 331666 | 6067929 ~ 6068392 (+) | True | G408821 |
| TU485290 | lncRNA | downstream | 334323 | 6070586 ~ 6070797 (+) | True | G408823 |
| TU485291 | lncRNA | downstream | 335339 | 6071602 ~ 6072496 (+) | False | G408824 |
| XM_026918304.2 | mRNA | upstream | 3561 | 5719914 ~ 5730099 (+) | True | lats1 |
| XM_026917556.2 | mRNA | upstream | 14009 | 5713456 ~ 5719651 (+) | True | nup43 |
| XM_026917736.2 | mRNA | upstream | 39216 | 5684076 ~ 5694444 (+) | True | lrp11 |
| XM_034301888.1 | mRNA | upstream | 130190 | 5589857 ~ 5603470 (+) | True | LOC113529080 |
| XM_026917866.2 | mRNA | upstream | 176142 | 5548623 ~ 5557518 (+) | True | katna1 |
| XM_026918143.2 | mRNA | downstream | 42160 | 5778423 ~ 5808281 (+) | True | ube2j1 |
| XM_026918197.2 | mRNA | downstream | 74051 | 5810314 ~ 5834943 (+) | True | gabrr2b |
| XM_034301907.1 | mRNA | downstream | 74051 | 5810314 ~ 5834943 (+) | False | gabrr2b |
| XM_026918214.2 | mRNA | downstream | 111749 | 5848012 ~ 5863616 (+) | True | gabrr1 |
| XM_026917970.2 | mRNA | downstream | 167316 | 5903579 ~ 5909895 (+) | True | arpc5b |
| XR_004577669.1 | other | upstream | 1073965 | 4655964 ~ 4659695 (+) | True | LOC113529331 |
| XR_003403042.2 | other | upstream | 1073965 | 4655964 ~ 4659695 (+) | False | LOC113529331 |
| TU483755 | other | upstream | 1852038 | 3876675 ~ 3881622 (+) | False | LOC117596542 |
| XR_004577677.1 | other | upstream | 1983469 | 3672852 ~ 3750191 (+) | False | tab2 |
| trnag-gcc_30 | other | downstream | 6529 | 5742792 ~ 5742862 (+) | True | trnag-gcc_30 |
| XR_004577658.1 | other | downstream | 535769 | 6272032 ~ 6276665 (+) | True | LOC117596600 |
| TU485379 | other | downstream | 746838 | 6483101 ~ 6795220 (+) | True | G408893 |
| TU485443 | other | downstream | 820100 | 6556363 ~ 6563776 (+) | True | G408929 |
| TU485391 | other | downstream | 1113243 | 6849506 ~ 6851954 (+) | False | LOC117596594 |
