RNA id: TU99727


Basic Information

Item Value
RNA id TU99727
length 201
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G79963
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 25724477 ~ 25724677 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtaaaattgcattttatataatgttttcatcaTTCTGCTTTCTTTAACATTACTAgtactttattttgatttcccctatccCCCTTCCCCTTAGCTATGACTGCACattttgtctgcacttattagctgttacaatctaggatgtaagacttgtattttgtattatctgtatattttcctatggacttgtgtaattttgaa

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99716 lncRNA downstream 199978 25516064 ~ 25524499 (-) False AMCG00010343
TU99633 lncRNA downstream 920314 24800669 ~ 24804163 (-) True G79882
TU99626 lncRNA downstream 965214 24723835 ~ 24759263 (-) True G79881
TU99612 lncRNA downstream 1073845 24601132 ~ 24650632 (-) True G79872
TU99563 lncRNA downstream 1414288 24307904 ~ 24310189 (-) True G79837
TU99751 lncRNA upstream 119666 25844343 ~ 25886490 (-) True G79984
TU99870 lncRNA upstream 294286 26018963 ~ 26021958 (-) True G80080
TU99890 lncRNA upstream 344626 26069303 ~ 26069625 (-) True G80094
TU99891 lncRNA upstream 354123 26078800 ~ 26080513 (-) True G80095
TU99883 lncRNA upstream 402379 26127056 ~ 26127305 (-) True G80090
AMCG00010343 mRNA downstream 168397 25521195 ~ 25556080 (-) True AMCG00010343
AMCG00010342 mRNA downstream 511978 25201333 ~ 25212499 (-) True AMCG00010342
AMCG00010341 mRNA downstream 558501 25158070 ~ 25165976 (-) True AMCG00010341
AMCG00010339 mRNA downstream 604134 25118889 ~ 25120343 (-) True AMCG00010339
AMCG00010340 mRNA downstream 662573 25018454 ~ 25061904 (-) True AMCG00010340
AMCG00010348 mRNA upstream 167321 25891998 ~ 25911171 (-) True AMCG00010348
AMCG00010349 mRNA upstream 190237 25914914 ~ 25940115 (-) True AMCG00010349
AMCG00010350 mRNA upstream 357303 26081980 ~ 26118160 (-) True AMCG00010350
AMCG00010351 mRNA upstream 472364 26197041 ~ 26202850 (-) True AMCG00010351
AMCG00010352 mRNA upstream 479805 26204482 ~ 26219813 (-) True AMCG00010352
TU99273 other downstream 2359530 23359643 ~ 23364947 (-) True G79601
TU99198 other downstream 2638492 23082846 ~ 23085985 (-) False AMCG00010288
TU98958 other downstream 3742503 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 4642652 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 4783084 20931171 ~ 20941393 (-) True G79147
TU99963 other upstream 648065 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 6229707 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 7270773 32995450 ~ 32999999 (-) False AMCG00010509
TU101930 other upstream 9990274 35714951 ~ 35716672 (-) True G81716
TU102168 other upstream 10953020 36677697 ~ 36683818 (-) True AMCG00010602

Expression Profile