RNA id: TU99890


Basic Information

Item Value
RNA id TU99890
length 323
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G80094
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26069303 ~ 26069625 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCCACAATACACCGCTGTCAGCGCACTGTACTTCAATGTAAAACAGTCTGTTATGCTAAAGGCTGTTAACAGGTCAGAATAAACCCGACACACTGAGGCTAAATGGAGATTGTATCCCAGGACACTTTGTAACGGCTTGTGTTTGAACCCGTGGCCGTCGTTACCTTTATCCTCTCGACACTGGCCTCCAGCTTGAGCTGCTCCACCAGGCGCCGCATAGAGCTCAGGTTGGAGTTGGACGACATGTTTCTTGTGCTTCTGCCGGCGGTGGACGGTGGCTCGGCGCGGAGTCCGGAGCGGAGCGGAGCGGAGCGGAGCGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99870 lncRNA downstream 47345 26018963 ~ 26021958 (-) True G80080
TU99751 lncRNA downstream 182813 25844343 ~ 25886490 (-) True G79984
TU99727 lncRNA downstream 344626 25724477 ~ 25724677 (-) True G79963
TU99716 lncRNA downstream 544804 25516064 ~ 25524499 (-) False AMCG00010343
TU99633 lncRNA downstream 1265140 24800669 ~ 24804163 (-) True G79882
TU99891 lncRNA upstream 9175 26078800 ~ 26080513 (-) True G80095
TU99883 lncRNA upstream 57431 26127056 ~ 26127305 (-) True G80090
TU99897 lncRNA upstream 59341 26128966 ~ 26129228 (-) True G80100
TU99899 lncRNA upstream 87971 26157596 ~ 26158155 (-) True G80102
TU99900 lncRNA upstream 88601 26158226 ~ 26158788 (-) True G80103
AMCG00010349 mRNA downstream 129188 25914914 ~ 25940115 (-) True AMCG00010349
AMCG00010348 mRNA downstream 158132 25891998 ~ 25911171 (-) True AMCG00010348
AMCG00010343 mRNA downstream 513223 25521195 ~ 25556080 (-) True AMCG00010343
AMCG00010342 mRNA downstream 856804 25201333 ~ 25212499 (-) True AMCG00010342
AMCG00010341 mRNA downstream 903327 25158070 ~ 25165976 (-) True AMCG00010341
AMCG00010350 mRNA upstream 12355 26081980 ~ 26118160 (-) True AMCG00010350
AMCG00010351 mRNA upstream 127416 26197041 ~ 26202850 (-) True AMCG00010351
AMCG00010352 mRNA upstream 134857 26204482 ~ 26219813 (-) True AMCG00010352
AMCG00010363 mRNA upstream 155662 26225287 ~ 26247508 (-) True AMCG00010363
AMCG00010364 mRNA upstream 303752 26373377 ~ 26375156 (-) False AMCG00010364
TU99273 other downstream 2704356 23359643 ~ 23364947 (-) True G79601
TU99198 other downstream 2983318 23082846 ~ 23085985 (-) False AMCG00010288
TU98958 other downstream 4087329 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 4987478 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 5127910 20931171 ~ 20941393 (-) True G79147
TU99963 other upstream 303117 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 5884759 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 6925825 32995450 ~ 32999999 (-) False AMCG00010509
TU101930 other upstream 9645326 35714951 ~ 35716672 (-) True G81716
TU102168 other upstream 10608072 36677697 ~ 36683818 (-) True AMCG00010602

Expression Profile