RNA id: TU99897


Basic Information

Item Value
RNA id TU99897
length 263
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G80100
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26128966 ~ 26129228 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaagagacacacactcacacacacccaccgcCGCATAAATAAAAACGAAAGGGCCTGACTTACACGTAGATGATAGACATGAAATGCATGAGCCAGAGGACGATGAAGAGGATGAATCCGAAGAAGGCGAGCCCCTGTAGGGCGAGTTCCAGTAGGGCCATGGCTGTATTGGAGAAATGCAAACACACCGGGAAAGGCGCTGGCTAGGGGAGCGCTGAGGCGACTGAAGAAGAGAGCTCGGTGCAGCGGACACTGCGGGCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99883 lncRNA downstream 1661 26127056 ~ 26127305 (-) True G80090
TU99891 lncRNA downstream 48453 26078800 ~ 26080513 (-) True G80095
TU99890 lncRNA downstream 59341 26069303 ~ 26069625 (-) True G80094
TU99870 lncRNA downstream 107008 26018963 ~ 26021958 (-) True G80080
TU99751 lncRNA downstream 242476 25844343 ~ 25886490 (-) True G79984
TU99899 lncRNA upstream 28368 26157596 ~ 26158155 (-) True G80102
TU99900 lncRNA upstream 28998 26158226 ~ 26158788 (-) True G80103
TU99901 lncRNA upstream 31102 26160330 ~ 26161258 (-) True G80104
TU99924 lncRNA upstream 179315 26308543 ~ 26314251 (-) True G80112
TU99964 lncRNA upstream 238704 26367932 ~ 26379747 (-) False AMCG00010364
AMCG00010350 mRNA downstream 10806 26081980 ~ 26118160 (-) True AMCG00010350
AMCG00010349 mRNA downstream 188851 25914914 ~ 25940115 (-) True AMCG00010349
AMCG00010348 mRNA downstream 217795 25891998 ~ 25911171 (-) True AMCG00010348
AMCG00010343 mRNA downstream 572886 25521195 ~ 25556080 (-) True AMCG00010343
AMCG00010342 mRNA downstream 916467 25201333 ~ 25212499 (-) True AMCG00010342
AMCG00010351 mRNA upstream 67813 26197041 ~ 26202850 (-) True AMCG00010351
AMCG00010352 mRNA upstream 75254 26204482 ~ 26219813 (-) True AMCG00010352
AMCG00010363 mRNA upstream 96059 26225287 ~ 26247508 (-) True AMCG00010363
AMCG00010364 mRNA upstream 244149 26373377 ~ 26375156 (-) False AMCG00010364
AMCG00010371 mRNA upstream 282982 26412210 ~ 26426658 (-) True AMCG00010371
TU99273 other downstream 2764019 23359643 ~ 23364947 (-) True G79601
TU99198 other downstream 3042981 23082846 ~ 23085985 (-) False AMCG00010288
TU98958 other downstream 4146992 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 5047141 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 5187573 20931171 ~ 20941393 (-) True G79147
TU99963 other upstream 243514 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 5825156 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 6866222 32995450 ~ 32999999 (-) False AMCG00010509
TU101930 other upstream 9585723 35714951 ~ 35716672 (-) True G81716
TU102168 other upstream 10548469 36677697 ~ 36683818 (-) True AMCG00010602

Expression Profile