GENE ID: ENSDARG00000093303

Symbol Location Gene type Genome version Species
ifitm1 5: 33258289 ~ 33259079 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000093303 (ifitm1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE151354 (wild type) cartilage baseline 21dpf, wild type Melanoma cells (cluster: 9)
    Melanoma cells (cluster: 11)
    		 marker
    marker
    		 DOI:10.1359/JBMR.080412
    DOI:10.1359/JBMR.080412
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    		 marker
    marker
    		 DOI:10.1359/JBMR.080412
    DOI:10.1359/JBMR.080412
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Osteoblast (cluster: 1)
    Osteoblast (cluster: 3)
    		 marker
    marker
    		 DOI:10.1002/jbmr.4042
    DOI:10.1002/jbmr.4042
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Osteoblast (cluster: 1)
    		 marker
    		 DOI:10.1002/jbmr.4042
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Mesenchymal cells (cluster: 3)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated Mesenchymal cells (cluster: 2)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated Mesenchymal cells (cluster: 2)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Mesenchymal cells (cluster: 1)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Mesenchymal cells (cluster: 1)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Mesenchymal cells (cluster: 4)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Endothelium (cluster: 15)
    		 potential marker
    		 NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Cranial neural crest (cluster: 1)
    Enteric smooth muscle (cluster: 15)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Endocardial endothelial cells (cluster: 1)
    Fibroblasts (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Fibroblasts (cluster: 10)
    Endocardial endothelial cells (cluster: 3)
    Fibroblasts (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Fibroblasts (cluster: 3)
    Fibroblasts (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Endocardial endothelial cells (cluster: 3)
    Fibroblasts (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Smooth muscle cells (cluster: 11)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Smooth muscle cells (cluster: 4)
    Smooth muscle cells (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Smooth muscle cells (cluster: 3)
    Epithelial cells (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Smooth muscle cells (cluster: 10)
    Smooth muscle cells (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Stromal (cluster: 2)
    Stromal (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Stromal (cluster: 1)
    Stromal (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Smooth muscle cells (cluster: 12)
    Smooth muscle cells (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Epidermal cells (cluster: 12)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Epidermal cells (cluster: 11)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 12)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 14)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE158142 (3dpf) head baseline 3dpf, untreatment
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT

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