Gene
RNA
| Item | Value |
|---|---|
| gene id | G454615 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000320 |
| NCBI id | null |
| chromosome length | 3894707 |
| location | 849157 ~ 867291 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU521942 | False | 1273 | lncRNA | 0.46 | 8 | 849157 | 861657 |
| TU521944 | True | 641 | lncRNA | 0.47 | 4 | 860461 | 867291 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000320_00745852_00758696 | SLC25A32A, SLC25A32 | coding | downstream | 90051 | 745030 ~ 759106 (-) |
| CI01000320_00688829_00696138 | NA | coding | downstream | 152969 | 688688 ~ 696188 (-) |
| CI01000320_00586900_00592523 | FAM210AA | coding | downstream | 256634 | 585993 ~ 592523 (-) |
| CI01000320_00442550_00456381 | PTPN2B | coding | downstream | 392770 | 442124 ~ 456387 (-) |
| CI01000320_00420198_00423170 | NA | coding | downstream | 425987 | 419963 ~ 423170 (-) |
| CI01000320_00935826_00945755 | LRP12 | coding | upstream | 67141 | 934432 ~ 945755 (-) |
| CI01000320_01042859_01043564 | NA | coding | upstream | 174733 | 1042024 ~ 1043564 (-) |
| CI01000320_01176457_01181900 | NA | coding | upstream | 307444 | 1174735 ~ 1181900 (-) |
| CI01000320_01207179_01217428 | EPB41 | coding | upstream | 339888 | 1207179 ~ 1217438 (-) |
| CI01000320_01263151_01266426 | CTGFB | coding | upstream | 395748 | 1263039 ~ 1266426 (-) |
| G454593 | NA | non-coding | downstream | 113251 | 733458 ~ 735906 (-) |
| G454545 | NA | non-coding | downstream | 119790 | 650216 ~ 729367 (-) |
| G454586 | NA | non-coding | downstream | 124792 | 722955 ~ 724365 (-) |
| G454585 | NA | non-coding | downstream | 125480 | 722531 ~ 723677 (-) |
| G454538 | NA | non-coding | downstream | 222957 | 625919 ~ 626200 (-) |
| G454639 | NA | non-coding | upstream | 58773 | 926064 ~ 926309 (-) |
| G454649 | NA | non-coding | upstream | 115292 | 982583 ~ 982844 (-) |
| G454650 | NA | non-coding | upstream | 135198 | 1002489 ~ 1002717 (-) |
| G454651 | NA | non-coding | upstream | 136999 | 1004290 ~ 1004509 (-) |
| G454652 | NA | non-coding | upstream | 137532 | 1004823 ~ 1005133 (-) |
| G454495 | NA | other | downstream | 320605 | 527059 ~ 528552 (-) |
| CI01000320_00346954_00349228 | ZNF706.2.S, ZNF706.2.L, ZNF706, ZNF706.2 | other | downstream | 498955 | 346199 ~ 349445 (-) |
| G454663 | NA | other | upstream | 184177 | 1051468 ~ 1055895 (-) |
| G454686 | NA | other | upstream | 273951 | 1141242 ~ 1141880 (-) |
| CI01000320_01338270_01341123 | SH3BGRL3 | other | upstream | 468988 | 1336279 ~ 1343274 (-) |
| CI01000320_01426753_01430603 | NA | other | upstream | 559492 | 1426176 ~ 1430654 (-) |
| G456317 | NA | other | upstream | 2775946 | 3643237 ~ 3648040 (-) |
