trnat-agu-151


Basic Information

Item Value
gene id trnat-agu-151
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37505561 ~ 37505634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-151
ggtgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagcGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-151 True 74 mRNA 0.51 1 37505561 37505634

Neighbor

gene id symbol gene type direction distance location
mre11a mre11a coding upstream 147955 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 230479 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 641594 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 802038 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 886835 36610735 ~ 36618726 (+)
trnat-agu-152 NA coding downstream 95 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 30895 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 546999 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 964284 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 1113916 38619550 ~ 38628170 (+)
G2079469 NA non-coding upstream 135825 37368859 ~ 37369736 (+)
G2079465 NA non-coding upstream 139654 37365664 ~ 37365907 (+)
G2079462 NA non-coding upstream 141177 37363277 ~ 37364384 (+)
G2079459 NA non-coding upstream 143703 37361581 ~ 37361858 (+)
G2079458 NA non-coding upstream 144261 37360939 ~ 37361300 (+)
G2079563 NA non-coding downstream 38911 37544545 ~ 37546090 (+)
G2079600 NA non-coding downstream 122187 37627821 ~ 37631175 (+)
G2079606 NA non-coding downstream 133252 37638886 ~ 37639112 (+)
G2079607 NA non-coding downstream 148165 37653799 ~ 37654022 (+)
G2079608 NA non-coding downstream 149894 37655528 ~ 37684763 (+)
G2079468 LOC106581367 other upstream 137425 37366739 ~ 37368136 (+)
G2079197 NA other upstream 224729 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 1066207 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1203519 36263506 ~ 36302664 (+)
G2079657 NA other downstream 310244 37815848 ~ 37819286 (+)
G2080014 NA other downstream 439298 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2322024 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2390033 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2426240 39931874 ~ 39933835 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnat-agu_14 NA coding NC_053130.1 CM020927.1 2118747 ~ 2118820 (+)
tiger barb (Puntius tetrazona) trnaa-ugc_8 NA coding NC_056704.1 CM032073.1 13426004 ~ 13426075 (-)