RNA id: TU157459



Basic Information


Item Value
RNA id TU157459
length 279
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G106572
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13817388 ~ 13817880 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTATCGTTGCGTCCTCTGAGGCAGAAACTATGACGCTGAAAACAGGATGGAAAATGACTCTGGTGACAGGACTCCTGTGACCGCTCAGGGCGTATCTCTCAGGAGGACGGGGAATCCATTCTTTGGGGTCTCGCTTCTGTCCAACTGGTCCACCTAAAGTAATCTCTTCTTTTGCCTCATtcagttttgattctaattccaTCACCTTTTTCTGTAATCTGATGACTGAAGTCCATTTCTTTTCCAGTAGACCCGCATACTTCTTATCCAATTCCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157448 lncRNA downstream 19140 13785178 ~ 13798248 (-) True G106561
TU157430 lncRNA downstream 61228 13753322 ~ 13756160 (-) True G106548
TU157410 lncRNA downstream 148163 13667571 ~ 13669225 (-) False G106541
TU157480 lncRNA upstream 154170 13972050 ~ 13976201 (-) True G106588
TU157497 lncRNA upstream 188171 14006051 ~ 14006319 (-) False mmp20a
TU157542 lncRNA upstream 235544 14053424 ~ 14053535 (-) True G106631
TU157544 lncRNA upstream 241095 14058975 ~ 14059178 (-) True G106633
TU157545 lncRNA upstream 244692 14062572 ~ 14062837 (-) True G106634
XM_043259455.1 mRNA downstream 66331 13744555 ~ 13751057 (-) True LOC122359192
XM_043258354.1 mRNA downstream 75537 13715585 ~ 13741851 (-) True LOC122358517
XM_043258356.1 mRNA downstream 85704 13715585 ~ 13731684 (-) False LOC122358517
XM_043258355.1 mRNA downstream 86500 13715585 ~ 13730888 (-) False LOC122358517
XM_043259847.1 mRNA downstream 124759 13678485 ~ 13692629 (-) True LOC122359517
XM_043259145.1 mRNA upstream 90926 13908806 ~ 13925727 (-) True cluha
XM_043258964.1 mRNA upstream 108911 13926791 ~ 13938370 (-) True ccdc92ba
XM_043258965.1 mRNA upstream 122475 13940355 ~ 13955616 (-) True tlcd2
XM_043259907.1 mRNA upstream 164987 13982867 ~ 13995314 (-) False hif1al
XM_043259909.1 mRNA upstream 164987 13982867 ~ 13990829 (-) True hif1al
TU157426 other downstream 68179 13747036 ~ 13749209 (-) False LOC122359192
XR_006252707.1 other downstream 356285 13455981 ~ 13461103 (-) False ercc2
TU156053 other downstream 2311211 11464775 ~ 11506177 (-) False igsf9ba
TU156138 other downstream 2459840 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 2485490 11329902 ~ 11331898 (-) False LOC122358625
TU157457 other upstream 60705 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 66040 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 102189 13920069 ~ 13925707 (-) False cluha
TU157568 other upstream 480464 14298344 ~ 14322397 (-) False LOC122359058
TU158145 other upstream 1958628 15776508 ~ 15782011 (-) True G107064

Expression Profile