RNA id: TU157448



Basic Information


Item Value
RNA id TU157448
length 427
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G106561
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13785178 ~ 13798248 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGTTTTctagtttctttattcattttaatacaaaaggATACTCGGACCAAAAATAATTAGATTGTTATTTAGAAGAATTGACATTAAGGTACCACTCAttaaagaaaccaaaacaaacacacaaagggCATGacaaatatttcatgttgaaaACAGAATACAGGAAAACAGCAGAAATCCCCCCCAAAAAGTAGTGATCTGTTCAACACCAGACGACACTGACAGAGCACTGTATGTTTGTTCTATGTAGATTTAGATAATTTAcgtttattattgtattttataatggGTTTGTGCAGATAATTTTAAgagaaaatgtaacaaaatgtgCCACAGGCTGAGGGTAGAGGTGGCTGCagtcttttctttgtttgctttctgCTGCATTAGCTGGAGTGCTGCCATCTTCATAAAGAGGAGATATCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157430 lncRNA downstream 29018 13753322 ~ 13756160 (-) True G106548
TU157408 lncRNA downstream 115799 13667571 ~ 13669379 (-) True G106541
TU157402 lncRNA downstream 115953 13667571 ~ 13669225 (-) False G106541
TU157459 lncRNA upstream 19140 13817388 ~ 13817880 (-) True G106572
TU157480 lncRNA upstream 173802 13972050 ~ 13976201 (-) True G106588
TU157497 lncRNA upstream 207803 14006051 ~ 14006319 (-) False mmp20a
TU157542 lncRNA upstream 255176 14053424 ~ 14053535 (-) True G106631
TU157544 lncRNA upstream 260727 14058975 ~ 14059178 (-) True G106633
XM_043259455.1 mRNA downstream 34121 13744555 ~ 13751057 (-) True LOC122359192
XM_043258354.1 mRNA downstream 43327 13715585 ~ 13741851 (-) True LOC122358517
XM_043258356.1 mRNA downstream 53494 13715585 ~ 13731684 (-) False LOC122358517
XM_043258355.1 mRNA downstream 54290 13715585 ~ 13730888 (-) False LOC122358517
XM_043259847.1 mRNA downstream 92549 13678485 ~ 13692629 (-) True LOC122359517
XM_043259145.1 mRNA upstream 110558 13908806 ~ 13925727 (-) True cluha
XM_043258964.1 mRNA upstream 128543 13926791 ~ 13938370 (-) True ccdc92ba
XM_043258965.1 mRNA upstream 142107 13940355 ~ 13955616 (-) True tlcd2
XM_043259907.1 mRNA upstream 184619 13982867 ~ 13995314 (-) False hif1al
XM_043259909.1 mRNA upstream 184619 13982867 ~ 13990829 (-) True hif1al
TU157426 other downstream 35969 13747036 ~ 13749209 (-) False LOC122359192
XR_006252707.1 other downstream 324075 13455981 ~ 13461103 (-) False ercc2
TU156053 other downstream 2279001 11464775 ~ 11506177 (-) False igsf9ba
TU156138 other downstream 2427630 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 2453280 11329902 ~ 11331898 (-) False LOC122358625
TU157457 other upstream 80337 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 85672 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 121821 13920069 ~ 13925707 (-) False cluha
TU157568 other upstream 500096 14298344 ~ 14322397 (-) False LOC122359058
TU158145 other upstream 1978260 15776508 ~ 15782011 (-) True G107064

Expression Profile