RNA id: XM_043258355.1



Basic Information


Item Value
RNA id XM_043258355.1
length 902
RNA type mRNA
GC content 0.53
exon number 5
gene id LOC122358517
representative False

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13715585 ~ 13741851 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTTATGCACGTTACATACAGTGGTTCCTGTTTGCTTAATGACTGATGAGGTCCTTTCAGTTTCTGCTGGAATAAGATTCATTTGGATACCTTTTGTCGTTCGGTAGCCATTTGCTTCAAATTAGTTATGAGTACTAACTAAACTACGGCGAGAGGACATAATTCACAGCTAACCGCATTGGTGGTCATTCCGGCTGATGCTGCAGTGCCTTGCAGATCAGCTGCCAAGCGCCCCTCCTCTGTGTCCTCGCTGAGTGGGATCGTGAGCCGCATGGCCTCCTCGGGGGGCGCATCCCGCGGGAGCTGCACCTCCGTTAACACAGTGTGCTCCGACAGTGACCGCGGAGCCAGTCTCAGTTCCTCTGCCTCATCCGCCTCGCTGCAGGATGGAcactcttcctcttcctcctcatcgCTCCCCTACGGAGCCGTGCCGACTTACCCCGCGCCACAGCGCAATGGCTCCGACATCAGTCTGGACCTCACCCCTCTCTCCCTGCTGACAGGAGCCGGTCCCCTCCCCACCTCCACAACACCGCTGCCCAAACTCACTCGTCTGGAGAGGGTGGCGCTGGAGATAGTGGAGACCGAGCAGGCCTACGTGAGGGACCTCAAGAGCATAGTGGAGGACTATCTTGGCTGCATTATTGACTGTGGCGACTTGCCTCTCAAACCCGAGGAGGTCAGCACCCTCTTCTGCAACATCGAAGACATCTATGAGTTTAACAGtgagcTTTTGGAAGATCTGGAACGTAGTCCTCATGCGGCAGCCATAGCAGAGTGCTTTGTGGAAAGGagtGAAGCTTTTGACATTTACACCATATACTGCATGAATTACCCCAAGTAAGTATTTCTATGTCTATATGATCATTAAggtaccattcaaatgtttggtaTCGGta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157408 lncRNA downstream 46206 13667571 ~ 13669379 (-) True G106541
TU157402 lncRNA downstream 46360 13667571 ~ 13669225 (-) False G106541
TU157430 lncRNA upstream 22434 13753322 ~ 13756160 (-) True G106548
TU157448 lncRNA upstream 54290 13785178 ~ 13798248 (-) True G106561
TU157459 lncRNA upstream 86500 13817388 ~ 13817880 (-) True G106572
TU157480 lncRNA upstream 241162 13972050 ~ 13976201 (-) True G106588
TU157497 lncRNA upstream 275163 14006051 ~ 14006319 (-) False mmp20a
XM_043259847.1 mRNA downstream 22956 13678485 ~ 13692629 (-) True LOC122359517
XM_043259116.1 mRNA downstream 140820 13565103 ~ 13574765 (-) True appbp2
XM_043259114.1 mRNA downstream 154674 13521693 ~ 13560911 (-) False usp32
XM_043259455.1 mRNA upstream 13667 13744555 ~ 13751057 (-) True LOC122359192
XM_043259145.1 mRNA upstream 177918 13908806 ~ 13925727 (-) True cluha
XM_043258964.1 mRNA upstream 195903 13926791 ~ 13938370 (-) True ccdc92ba
XM_043258965.1 mRNA upstream 209467 13940355 ~ 13955616 (-) True tlcd2
XM_043259907.1 mRNA upstream 251979 13982867 ~ 13995314 (-) False hif1al
XR_006252707.1 other downstream 254482 13455981 ~ 13461103 (-) False ercc2
TU156053 other downstream 2209408 11464775 ~ 11506177 (-) False igsf9ba
TU156138 other downstream 2358037 11353841 ~ 11357548 (-) False LOC122358627
TU156125 other downstream 2383687 11329902 ~ 11331898 (-) False LOC122358625
TU156117 other downstream 2411023 11303421 ~ 11304562 (-) False LOC122358622
TU157426 other upstream 16148 13747036 ~ 13749209 (-) False LOC122359192
TU157457 other upstream 147697 13878585 ~ 13881694 (-) True G106570
TU157458 other upstream 153032 13883920 ~ 13905494 (-) True G106571
TU157450 other upstream 189181 13920069 ~ 13925707 (-) False cluha
TU157568 other upstream 567456 14298344 ~ 14322397 (-) False LOC122359058

Expression Profile