Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000057_03817584_03827165.mRNA |
| length | 1575 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | CI01000057_03817584_03827165 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 3817026 ~ 3827165 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016791 | phosphatase activity | molecular_function |
| id | description |
|---|---|
| K17616 | CTDSPL2; CTD small phosphatase-like protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU278522 | lncRNA | upstream | 667 | 3815633 ~ 3816359 (+) | True | G245357 |
| TU278599 | lncRNA | upstream | 52401 | 3764311 ~ 3764625 (+) | True | G245430 |
| TU278514 | lncRNA | upstream | 108578 | 3707828 ~ 3708448 (+) | True | G245349 |
| TU278523 | lncRNA | upstream | 110172 | 3706357 ~ 3706854 (+) | True | G245358 |
| TU278597 | lncRNA | upstream | 133672 | 3683154 ~ 3683354 (+) | True | G245428 |
| TU278502 | lncRNA | downstream | 20138 | 3847303 ~ 3848415 (+) | True | G245341 |
| TU278511 | lncRNA | downstream | 22006 | 3849171 ~ 3851942 (+) | True | G245346 |
| TU278608 | lncRNA | downstream | 71159 | 3898324 ~ 3898641 (+) | True | G245439 |
| TU278524 | lncRNA | downstream | 72355 | 3899520 ~ 3907602 (+) | True | G245359 |
| TU278610 | lncRNA | downstream | 84426 | 3911591 ~ 3918597 (+) | True | G245441 |
| CI01000057_03790271_03807327.mRNA | mRNA | upstream | 9699 | 3790189 ~ 3807327 (+) | True | CI01000057_03790271_03807327 |
| CI01000057_03752329_03758938.mRNA | mRNA | upstream | 57917 | 3751404 ~ 3759109 (+) | True | CI01000057_03752329_03758938 |
| CI01000057_03719251_03750681.mRNA | mRNA | upstream | 66225 | 3719251 ~ 3750801 (+) | True | CI01000057_03719251_03750681 |
| CI01000057_03709399_03714556.mRNA | mRNA | upstream | 102467 | 3708944 ~ 3714559 (+) | True | CI01000057_03709399_03714556 |
| CI01000057_03692584_03701758.mRNA | mRNA | upstream | 114994 | 3692584 ~ 3702032 (+) | True | CI01000057_03692584_03701758 |
| CI01000057_03842028_03844033.mRNA | mRNA | downstream | 14863 | 3842028 ~ 3844159 (+) | False | CI01000057_03842028_03844033 |
| CI01000057_03857470_03880767.mRNA | mRNA | downstream | 30305 | 3857470 ~ 3880879 (+) | True | CI01000057_03857470_03880767 |
| CI01000057_03943917_03961522.mRNA | mRNA | downstream | 116752 | 3943917 ~ 3961537 (+) | True | CI01000057_03943917_03961522 |
| CI01000057_03973241_03985010.mRNA | mRNA | downstream | 146076 | 3973241 ~ 3985057 (+) | True | CI01000057_03973241_03985010 |
| CI01000057_03999611_04005699.mRNA | mRNA | downstream | 172446 | 3999611 ~ 4007102 (+) | True | CI01000057_03999611_04005699 |
| TU278566 | other | upstream | 278584 | 3537569 ~ 3538442 (+) | True | G245401 |
| TU278389 | other | upstream | 524464 | 3087096 ~ 3292562 (+) | True | G245231 |
| TU276930 | other | upstream | 1164466 | 2635237 ~ 2652560 (+) | False | G243991 |
| TU276911 | other | upstream | 1240174 | 2576453 ~ 2576852 (+) | False | G243975 |
| TU278506 | other | downstream | 14863 | 3842028 ~ 3844691 (+) | True | CI01000057_03842028_03844033 |
| TU278663 | other | downstream | 382732 | 4209897 ~ 4212081 (+) | True | G245486 |
| TU278934 | other | downstream | 1271520 | 5098685 ~ 5101450 (+) | False | G245725 |
| TU278935 | other | downstream | 1271520 | 5098685 ~ 5103606 (+) | True | G245725 |
| TU279053 | other | downstream | 1746739 | 5573904 ~ 5579843 (+) | True | CI01000057_05564489_05579041 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00006268 | True | 1679 | mRNA | 0.45 | 11 | NC_007122.7 | 5817202 ~ 5836286 (+) |
