RNA id: CI01180000_07631328_07632833.mRNA


Basic Information

Item Value
RNA id CI01180000_07631328_07632833.mRNA
length 703
RNA type mRNA
GC content 0.40
exon number 4
gene id CI01180000_07631328_07632833
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7631155 ~ 7632833 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCAGACTTTATGACTGCAGACATGACTGGCATTTTGAAGAAATTTTACCACATAGTTGCTTTCAGCTGGTACGCCTTTGTCATTCAGTCTATTTTTGCAAAAAGGGATTCAGATCTGCCACCTGGGATCTTTGTCTATGGCGGACCCTGGAAATATCTAACATTTTTAAACCTGGTCTTACAGATGGTGTTTTTTGGAATGGCTTCTGTGAATGACCTCCAGCCTGTGGGGAAAGGCTCAAAAATGTCATTTCTCTGCCTCTGCAAGGATTTGCTCTTTTCCGTCTTTGTGTTTCCAGTGGGAATGGTTGTAGTTCTGCTGTTTTGGCTGATCTTTGCCTATGACCGACAGCTGGTCTATCCAGCTTCACTGGACAGCTTCTTCCCTCAATGGATGAATCATGCTATGGGAAAGAACAACCAAAACTTACATGATGAATCAGAAGGAAGTGTTTACCAGACTAAAAATGACACACGATTCTTTGTAAATTGTGTTCTGGTGTACAGGCCCTATAAATATCTGATATGAACCAGATCCAAGTGATTTGAATGATGTCTGCAGCTTGTAATATCTACACTTGCATTATCACAGTTTTGTATATTTTGTATATGACCATTCCACTTCTGCTTATATAAATGTGACACAGTGTGTATCTGTGAAGTATGTCATACTGGGAACTTGCCACTTATAAAAATAATAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805408 lncRNA downstream 3054 7627876 ~ 7628101 (-) True G684128
TU805356 lncRNA downstream 98628 7531489 ~ 7532527 (-) True G684079
TU805328 lncRNA downstream 245691 7380701 ~ 7385464 (-) True G684054
TU805323 lncRNA downstream 281915 7348959 ~ 7349240 (-) True G684049
TU805294 lncRNA downstream 298006 7328754 ~ 7333149 (-) True G684020
TU805414 lncRNA upstream 99116 7731949 ~ 7802982 (-) True G684134
TU805427 lncRNA upstream 170167 7803000 ~ 7833188 (-) True G684147
TU805430 lncRNA upstream 201540 7834373 ~ 7834663 (-) True G684150
TU805432 lncRNA upstream 206775 7839608 ~ 7839813 (-) True G684152
TU805438 lncRNA upstream 236558 7869391 ~ 7870302 (-) True G684158
CI01180000_07598849_07621310.mRNA mRNA downstream 9845 7598233 ~ 7621310 (-) True CI01180000_07598849_07621310
CI01180000_07536722_07547119.mRNA mRNA downstream 84036 7536472 ~ 7547119 (-) True CI01180000_07536722_07547119
CI01180000_07491283_07505536.mRNA mRNA downstream 125619 7491283 ~ 7505536 (-) True CI01180000_07491283_07505536
CI01180000_07417697_07426881.mRNA mRNA downstream 204274 7417524 ~ 7426881 (-) True CI01180000_07417697_07426881
CI01180000_07414269_07416328.mRNA mRNA downstream 214827 7413768 ~ 7416328 (-) True CI01180000_07414269_07416328
CI01180000_07634809_07642632.mRNA mRNA upstream 1152 7633985 ~ 7643019 (-) True CI01180000_07634809_07642632
CI01180000_07664300_07675535.mRNA mRNA upstream 31021 7663854 ~ 7675535 (-) True CI01180000_07664300_07675535
CI01180000_07691853_07694359.mRNA mRNA upstream 58923 7691756 ~ 7694365 (-) True CI01180000_07691853_07694359
CI01180000_07696310_07709917.mRNA mRNA upstream 63477 7696310 ~ 7709917 (-) True CI01180000_07696310_07709917
CI01180000_07713320_07727939.mRNA mRNA upstream 79541 7712374 ~ 7728200 (-) True CI01180000_07713320_07727939
TU805357 other downstream 48352 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 105501 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 218023 7403147 ~ 7413132 (-) False G684018
TU805292 other downstream 218023 7403984 ~ 7413132 (-) True G684018
TU804922 other downstream 868311 6762075 ~ 6762844 (-) True G683673
TU805466 other upstream 277928 7910761 ~ 7911208 (-) False G684182
TU805835 other upstream 1089860 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 2265591 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 3708783 11341616 ~ 11343496 (-) True G686052

Expression Profile