RNA id: TU805408


Basic Information

Item Value
RNA id TU805408
length 226
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G684128
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7627876 ~ 7628101 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGACAGAAACCTGACTAAAACCAGACGATTACATTACTTTAAATGAGTCTAGCCCTCAAGGTTACGATCATCGACACAATCCTCGTCAGAAAGGCAAAGGGGGAGGTGTTGCTGTAATTTATAGTAATATCTTCAGTATTACTCAAAAGTCTTTCAAATATAATTCCTTCGAAGTGATGGTGCTTTATGTAACGTTATGTAAGTTGACATTTGTGCTGGCTACTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805356 lncRNA downstream 95349 7531489 ~ 7532527 (-) True G684079
TU805328 lncRNA downstream 242412 7380701 ~ 7385464 (-) True G684054
TU805323 lncRNA downstream 278636 7348959 ~ 7349240 (-) True G684049
TU805294 lncRNA downstream 294727 7328754 ~ 7333149 (-) True G684020
TU805232 lncRNA downstream 335163 7290800 ~ 7292713 (-) True G683960
TU805414 lncRNA upstream 103848 7731949 ~ 7802982 (-) True G684134
TU805427 lncRNA upstream 174899 7803000 ~ 7833188 (-) True G684147
TU805430 lncRNA upstream 206272 7834373 ~ 7834663 (-) True G684150
TU805432 lncRNA upstream 211507 7839608 ~ 7839813 (-) True G684152
TU805438 lncRNA upstream 241290 7869391 ~ 7870302 (-) True G684158
CI01180000_07598849_07621310.mRNA mRNA downstream 6566 7598233 ~ 7621310 (-) True CI01180000_07598849_07621310
CI01180000_07536722_07547119.mRNA mRNA downstream 80757 7536472 ~ 7547119 (-) True CI01180000_07536722_07547119
CI01180000_07491283_07505536.mRNA mRNA downstream 122340 7491283 ~ 7505536 (-) True CI01180000_07491283_07505536
CI01180000_07417697_07426881.mRNA mRNA downstream 200995 7417524 ~ 7426881 (-) True CI01180000_07417697_07426881
CI01180000_07414269_07416328.mRNA mRNA downstream 211548 7413768 ~ 7416328 (-) True CI01180000_07414269_07416328
CI01180000_07631328_07632833.mRNA mRNA upstream 3054 7631155 ~ 7632833 (-) True CI01180000_07631328_07632833
CI01180000_07634809_07642632.mRNA mRNA upstream 5884 7633985 ~ 7643019 (-) True CI01180000_07634809_07642632
CI01180000_07664300_07675535.mRNA mRNA upstream 35753 7663854 ~ 7675535 (-) True CI01180000_07664300_07675535
CI01180000_07691853_07694359.mRNA mRNA upstream 63655 7691756 ~ 7694365 (-) True CI01180000_07691853_07694359
CI01180000_07696310_07709917.mRNA mRNA upstream 68209 7696310 ~ 7709917 (-) True CI01180000_07696310_07709917
TU805357 other downstream 45073 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 102222 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 214744 7403147 ~ 7413132 (-) False G684018
TU805292 other downstream 214744 7403984 ~ 7413132 (-) True G684018
TU804922 other downstream 865032 6762075 ~ 6762844 (-) True G683673
TU805466 other upstream 282660 7910761 ~ 7911208 (-) False G684182
TU805835 other upstream 1094592 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 2270323 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 3713515 11341616 ~ 11343496 (-) True G686052

Expression Profile