RNA id: CI01180000_07491283_07505536.mRNA


Basic Information

Item Value
RNA id CI01180000_07491283_07505536.mRNA
length 1422
RNA type mRNA
GC content 0.49
exon number 15
gene id CI01180000_07491283_07505536
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7491283 ~ 7505536 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGGAGACTGTTTCCTCACACACACATGAATCCAGCAGCAGTAAGAGGAAAGTGATCGCGGTAGTGGGAGGCGGTTTGGTTGGATCTTTGAACGCCTGCTTCCTTGCCAAAAGAGGATTTGACGTCGAAGTATTTGAATCTCGGGAAGGTATTCGGCAGGCAAAAGTCGTGAGGGGTCGAAGCATCAACTTGGCCCTGTCCCATAGGGGGCGCCAGGCCTTGAAACACGTGGGAATGGAGGATAAGGTAGTCTCTAAAGGCATTCCAATGCATGCCCGTATGATCCATAATATGAGTGGAAAACGTTCTCCCATACCCTACGGCAAGAAGGGACAGGACATCCTCTCAGTGGACAGAGCCAACCTCAACAAGGAGCTGCTAACAGGGGCAGACGCATATCCAAACACTACACTGAACTTTAATCACAAGCTGCACGACTGGAGTCCAAAAACAGGAACAATGACCTTTATTGGGCTTGATGGCCAAAGAAAGGAGATGCAGGCTGATCTGATCGTAGGCTGTGATGGAGCTTTCTCTGCCGTCAGGAAGCAGTTCCTACGGCAAAGTCGTTTCAATTACAGCCAGACATACATTCCCCACGGGTACATGGAGCTCACCATGCCTCCTAAAGATGGAGATGTTGCGATGGAGCCCAATTATTTGCACATTTGGCCCAGGAACACTTTCATGATGATTGCCCTGCCTAACTTGGACAGGACATTCACATGCACCCTCTTCATGCCCTTTGAAGATTTCGAGAAGATCCGCAGCGGTGACGAGGTCATTCGTTTCTTCCAGAAATACTTCCCTGACTCTATACCTCTAATAGGAGTGGAGGCTCTCAAACAGGATTTCTTCCGGCTGCCTGCTCAGGCCATGGTCTCGGTGAAGTGCTCCCCGTATCATCTGTTTGATAAGTGTGTTCTCATGGGAGATGCGGCCCACGCTGTGGTTCCTTTCTATGGTCAAGGCATGAATGCGGGCTTTGAGGATTGTTTAGTTATCGACGAGATTATGGACCAGTTGAATGAAAACATTGGTGCTGTGCTTGAAGAATACAGCAGAGTCCGAGTACCTGACGATCACGCCATAGCTGACCTGGCCATGTACAACTATGTAGAGGTGAGGGCGCATGTCAATTCCAGATATTTCCTGTTCCGAAAATACCTGGACAATATCCTTCACTTCATCATGCCAAAAACAGTCATCCCCCTTTACACAATGGTCACGTTCACCAGAACACGGTACCATGAAGCGGTGAATCGCTGGCATTGGCAAGATAAGGTGATCACTCAAGGTCTGTGGCTGTGTGGTGTTGTGTCCGCAGCAGGAGGGACGTATGTCTTGGTCAGAAACTCTCACAAACTCCCTAGCATCTCTGTAGAGCATCTGTGGACCCGCATACTCGCTTTAAAACGCTTCT

Function

GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function

KEGG:

id description
K00486 KMO; kynurenine 3-monooxygenase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805328 lncRNA downstream 105819 7380701 ~ 7385464 (-) True G684054
TU805323 lncRNA downstream 142043 7348959 ~ 7349240 (-) True G684049
TU805294 lncRNA downstream 158134 7328754 ~ 7333149 (-) True G684020
TU805232 lncRNA downstream 198570 7290800 ~ 7292713 (-) True G683960
TU805231 lncRNA downstream 200565 7286938 ~ 7290718 (-) True G683959
TU805356 lncRNA upstream 25953 7531489 ~ 7532527 (-) True G684079
TU805408 lncRNA upstream 122340 7627876 ~ 7628101 (-) True G684128
TU805414 lncRNA upstream 226413 7731949 ~ 7802982 (-) True G684134
TU805427 lncRNA upstream 297464 7803000 ~ 7833188 (-) True G684147
TU805430 lncRNA upstream 328837 7834373 ~ 7834663 (-) True G684150
CI01180000_07417697_07426881.mRNA mRNA downstream 64402 7417524 ~ 7426881 (-) True CI01180000_07417697_07426881
CI01180000_07414269_07416328.mRNA mRNA downstream 74955 7413768 ~ 7416328 (-) True CI01180000_07414269_07416328
CI01180000_07379273_07380075.mRNA mRNA downstream 111208 7379203 ~ 7380075 (-) True CI01180000_07379273_07380075
CI01180000_07365562_07368471.mRNA mRNA downstream 122812 7365450 ~ 7368471 (-) True CI01180000_07365562_07368471
CI01180000_07244068_07250348.mRNA mRNA downstream 240374 7244019 ~ 7250909 (-) True CI01180000_07244068_07250348
CI01180000_07536722_07547119.mRNA mRNA upstream 30936 7536472 ~ 7547119 (-) True CI01180000_07536722_07547119
CI01180000_07598849_07621310.mRNA mRNA upstream 92697 7598233 ~ 7621310 (-) True CI01180000_07598849_07621310
CI01180000_07631328_07632833.mRNA mRNA upstream 125619 7631155 ~ 7632833 (-) True CI01180000_07631328_07632833
CI01180000_07634809_07642632.mRNA mRNA upstream 128449 7633985 ~ 7643019 (-) True CI01180000_07634809_07642632
CI01180000_07664300_07675535.mRNA mRNA upstream 158318 7663854 ~ 7675535 (-) True CI01180000_07664300_07675535
TU805291 other downstream 78151 7403147 ~ 7413132 (-) False G684018
TU805292 other downstream 78151 7403984 ~ 7413132 (-) True G684018
TU804922 other downstream 728439 6762075 ~ 6762844 (-) True G683673
TU804519 other downstream 1735757 5751044 ~ 5755526 (-) False G683294
TU804622 other downstream 1872012 5618207 ~ 5619271 (-) True G683394
TU805347 other upstream 1354 7506890 ~ 7525654 (-) True G684071
TU805357 other upstream 73868 7579404 ~ 7582803 (-) True G684080
TU805466 other upstream 405225 7910761 ~ 7911208 (-) False G684182
TU805835 other upstream 1217157 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 2392888 9898424 ~ 9901388 (-) True G684929

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00013207 True 2124 mRNA 0.45 15 NC_007124.7 42272515 ~ 42306348 (-)