RNA id: TU799434



Basic Information


Item Value
RNA id TU799434
length 273
lncRNA type inter_gene
GC content 0.31
exon number 2
gene id G678773
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1118289 ~ 1118645 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAGTCAGAATTGCAAGATATAAAGTCAGAATTGCAAGATATAAAGTCAGAATTGCGTGATATATAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGTGTGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGAGAGATATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU799300 lncRNA upstream 1797 1111203 ~ 1116492 (+) True G678641
TU799308 lncRNA upstream 27438 1040385 ~ 1090851 (+) True G678649
TU799298 lncRNA upstream 210907 902610 ~ 907382 (+) True G678639
TU799297 lncRNA upstream 235261 880016 ~ 883028 (+) True G678638
TU799395 lncRNA upstream 240691 877352 ~ 877598 (+) True G678736
TU799436 lncRNA downstream 7293 1125938 ~ 1126610 (+) True G678775
TU799288 lncRNA downstream 37677 1156322 ~ 1159139 (+) True G678631
TU799305 lncRNA downstream 54990 1173635 ~ 1177276 (+) True G678646
TU799480 lncRNA downstream 120162 1238807 ~ 1239064 (+) True G678819
TU799481 lncRNA downstream 120932 1239577 ~ 1239963 (+) True G678820
CI01180000_00955725_01050852.mRNA mRNA upstream 66463 954922 ~ 1051826 (+) True CI01180000_00955725_01050852
CI01180000_00947514_00949868.mRNA mRNA upstream 167383 946421 ~ 950906 (+) True CI01180000_00947514_00949868
CI01180000_00862066_00867985.mRNA mRNA upstream 250177 860746 ~ 868112 (+) True CI01180000_00862066_00867985
CI01180000_00812535_00858607.mRNA mRNA upstream 259284 811857 ~ 859005 (+) True CI01180000_00812535_00858607
CI01180000_00765917_00776252.mRNA mRNA upstream 341378 765797 ~ 776911 (+) True CI01180000_00765917_00776252
CI01180000_01196818_01224406.mRNA mRNA downstream 78141 1196786 ~ 1224915 (+) True CI01180000_01196818_01224406
CI01180000_01372608_01374455.mRNA mRNA downstream 252116 1370761 ~ 1374547 (+) True CI01180000_01372608_01374455
CI01180000_01380859_01385445.mRNA mRNA downstream 262056 1380701 ~ 1385783 (+) True CI01180000_01380859_01385445
CI01180000_01492241_01493781.mRNA mRNA downstream 373026 1491671 ~ 1494446 (+) True CI01180000_01492241_01493781
CI01180000_01542059_01545609.mRNA mRNA downstream 423414 1542059 ~ 1546080 (+) True CI01180000_01542059_01545609
TU799410 other upstream 52198 1059843 ~ 1066091 (+) True G678751
TU799069 other upstream 966637 147934 ~ 151652 (+) True G678440
TU799296 other downstream 30906 1149551 ~ 1155672 (+) True G678637
TU799630 other downstream 399708 1518353 ~ 1556151 (+) True G678946
TU799769 other downstream 676525 1795170 ~ 1799433 (+) True G679076
TU800043 other downstream 1270222 2388867 ~ 2397360 (+) True G679324
TU801024 other downstream 1571117 2693355 ~ 2694234 (+) True G680192

Expression Profile