RNA id: TCONS_00036059


Basic Information

Item Value
RNA id TCONS_00036059
length 913
RNA type mRNA
GC content 0.53
exon number 3
gene id XLOC_018316
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 40715163 ~ 40720530 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTTCAGTTTCTCCATAGTCGCGTACTTGGATTTGGTGACTGAACTTCAGAGGCGACGGAGTAAGTCCCTACAGGGCTCTCCACTCTTTACTTCTTTCCAGCTAGAACTCCCTCAAGATGGGTGACTGGAGTGCGTTGGGAAGGCTTCTTGACAAGGTGCAGGCCTACTCCACGGCCGGAGGGAAGGTCTGGCTCTCTGTGCTCTTCATCTTCCGGATCCTTGTTCTGGGAACAGCAGTGGAATCGGCCTGGGGTGACGAGCAGTCAGCTTTCAAGTGCAATACCCAGCAGCCTGGTTGCGAGAATGTCTGCTATGACAAATCGTTCCCCATCTCGCACGTGCGCTTCTGGGTGCTTCAGATCATCTTCGTGTCCACGCCGACGCTCCTGTACCTGGCGCATGTCTTCTACCTGATGCGAAAGGAGGAGAAACTCAACCCCTCTCTGCCGTGTACACATGCGAACGCACGCCTTGCCCTCATAGGGTGGACTGTTTCCTTTCTCGGCCCACCGAGAagaccatcttcatcatcttcatgcTAGTGGTTTCGCTCTTCTCGCTTTTGCTCAACATCATCGAGCTCTTCTACGTGCTCTTCAAACGAATCAAGGACCGCGTCAAAAGCCGACAAAACACACAGTTTCCCACTGGCACTTTGAGCCCCACGCCGAAGGAACTGTCTACGACCAAATACGCGTACTACAATGGTTGCTCCTCACCAACTGCACCGCTCTCACCAATGTCACCTCCAGGCTACAAACTGGCCACCGGCGAAAGGACCAACTCTTGCCGCAATTACAACAAGCAGGCTAATGAGCAGAATTGGGCCAACTACAGCACAGAACAGAATCGCTTGGGCCAGAATGGCAGCACCATCTCCAATTCACATGCACAAGCCTTCGACTACCCTGAT

Function

GO: NA

KEGG:

id description
ko04540 Gap junction
ko05412 Arrhythmogenic right ventricular cardiomyopathy
ko02000 Transporters

Ensembl:

ensembl_id ENSDART00000153151

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036055 lncRNA downstream 231922 40479929 ~ 40484965 (-) True XLOC_018315
TCONS_00036491 lncRNA downstream 379988 40330106 ~ 40336899 (-) True XLOC_018311
TCONS_00036944 lncRNA downstream 462402 40215369 ~ 40254485 (-) True XLOC_018309
TCONS_00036943 lncRNA downstream 462407 40215369 ~ 40254480 (-) False XLOC_018309
TCONS_00036047 lncRNA downstream 796713 39919232 ~ 39920174 (-) True XLOC_018308
TCONS_00036066 lncRNA upstream 36940 40757398 ~ 40758384 (-) True XLOC_018320
TCONS_00036945 lncRNA upstream 517246 41237704 ~ 41242669 (-) True XLOC_018323
TCONS_00036074 lncRNA upstream 1190112 41910570 ~ 41926435 (-) False XLOC_018325
TCONS_00036073 lncRNA upstream 1190112 41910570 ~ 41926474 (-) False XLOC_018325
TCONS_00036946 lncRNA upstream 1190112 41910570 ~ 42173191 (-) False XLOC_018325
TCONS_00036054 mRNA downstream 229603 40475576 ~ 40487284 (-) False XLOC_018315
TCONS_00036053 mRNA downstream 229679 40475576 ~ 40487208 (-) False XLOC_018315
TCONS_00036052 mRNA downstream 265772 40371897 ~ 40451115 (-) True XLOC_018314
TCONS_00036051 mRNA downstream 346151 40369257 ~ 40370736 (-) True XLOC_018313
TCONS_00036050 mRNA downstream 349394 40337423 ~ 40367493 (-) True XLOC_018312
TCONS_00036060 mRNA upstream 3749 40724207 ~ 40725142 (-) False XLOC_018317
TCONS_00036061 mRNA upstream 3824 40724282 ~ 40729364 (-) True XLOC_018317
TCONS_00036062 mRNA upstream 24296 40744754 ~ 40750953 (-) True XLOC_018318
TCONS_00036063 mRNA upstream 33060 40753518 ~ 40755614 (-) False XLOC_018319
TCONS_00036064 mRNA upstream 33447 40753905 ~ 40754794 (-) True XLOC_018319
TCONS_00036008 other downstream 1683951 39032821 ~ 39032936 (-) True XLOC_018289
TCONS_00036007 other downstream 1811274 38905531 ~ 38905613 (-) True XLOC_018288
TCONS_00035989 other downstream 2194238 38518697 ~ 38522649 (-) False XLOC_018280
TCONS_00035984 other downstream 2782572 37930687 ~ 37934315 (-) True XLOC_018273
TCONS_00035936 other downstream 5171693 35541282 ~ 35545194 (-) True XLOC_018246
TCONS_00036068 other upstream 41854 40762312 ~ 40766351 (-) False XLOC_018321
TCONS_00036069 other upstream 41874 40762332 ~ 40766350 (-) False XLOC_018321
TCONS_00036070 other upstream 41893 40762351 ~ 40766618 (-) True XLOC_018321
TCONS_00036071 other upstream 507606 41228064 ~ 41228179 (-) True XLOC_018322
TCONS_00036072 other upstream 632388 41352846 ~ 41352960 (-) True XLOC_018324

Expression Profile

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