RNA id: TCONS_00004208



Basic Information


Item Value
RNA id TCONS_00004208
length 198
RNA type mRNA
GC content 0.31
exon number 9
gene id XLOC_002188
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 27021164 ~ 27043164 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TTGTTGCTGTATCATGTCTGGCACAAGGTACATCAAcctactatTCCAGCAGCCGTCATCTTTAaaccaatctccatcattagcatcgatgttATTGAGAACTATTGTGAGAAGagctttacaaTcaaattgaactttttttATTTATCCTATTTCAAatatttaTTTGCAATAGTATATttcttacacattttttaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000183538

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00004206 lncRNA upstream 44210 26973601 ~ 26976954 (+) True XLOC_002186
TCONS_00005717 lncRNA upstream 138025 26882702 ~ 26883139 (+) True XLOC_002181
TCONS_00005716 lncRNA upstream 234379 26786369 ~ 26786785 (+) True XLOC_002175
TCONS_00004188 lncRNA upstream 249487 26766385 ~ 26771677 (+) True XLOC_002174
TCONS_00005715 lncRNA upstream 391882 26628793 ~ 26629282 (+) True XLOC_002167
TCONS_00005902 lncRNA downstream 18597 27061761 ~ 27064405 (+) False XLOC_002190
TCONS_00005903 lncRNA downstream 18778 27061942 ~ 27064405 (+) False XLOC_002190
TCONS_00005904 lncRNA downstream 125962 27169126 ~ 27198982 (+) True XLOC_002193
TCONS_00005905 lncRNA downstream 1160600 28203764 ~ 28246420 (+) False XLOC_002195
TCONS_00005906 lncRNA downstream 1190076 28233240 ~ 28246420 (+) True XLOC_002195
TCONS_00004207 mRNA upstream 29161 26990095 ~ 26992003 (+) True XLOC_002187
TCONS_00004203 mRNA upstream 42788 26972755 ~ 26978376 (+) False XLOC_002186
TCONS_00004205 mRNA upstream 42971 26973140 ~ 26978193 (+) False XLOC_002186
TCONS_00004204 mRNA upstream 43967 26973063 ~ 26977197 (+) False XLOC_002186
TCONS_00004202 mRNA upstream 48734 26961965 ~ 26972430 (+) True XLOC_002185
TCONS_00004209 mRNA downstream 9478 27052642 ~ 27058986 (+) True XLOC_002189
TCONS_00004212 mRNA downstream 25087 27068251 ~ 27093034 (+) True XLOC_002191
TCONS_00004213 mRNA downstream 52879 27096043 ~ 27158240 (+) False XLOC_002192
TCONS_00004214 mRNA downstream 52952 27096116 ~ 27158238 (+) True XLOC_002192
TCONS_00004215 mRNA downstream 1117101 28160265 ~ 28169169 (+) False XLOC_002194
TCONS_00004170 other upstream 714821 26306229 ~ 26306343 (+) True XLOC_002162
TCONS_00004166 other upstream 1056765 25964284 ~ 25964399 (+) True XLOC_002158
TCONS_00004165 other upstream 1060416 25948242 ~ 25960748 (+) True XLOC_002157
TCONS_00004149 other upstream 2348235 24668774 ~ 24672929 (+) False XLOC_002143
TCONS_00004147 other upstream 2356715 24660142 ~ 24664449 (+) False XLOC_002143
TCONS_00004210 other downstream 20010 27063174 ~ 27063257 (+) False XLOC_002190
TCONS_00004211 other downstream 20190 27063354 ~ 27063438 (+) True XLOC_002190
TCONS_00004216 other downstream 1117133 28160297 ~ 28162247 (+) True XLOC_002194
TCONS_00004217 other downstream 1209514 28252678 ~ 28252795 (+) True XLOC_002196
TCONS_00004234 other downstream 2223627 29266791 ~ 29268413 (+) True XLOC_002204