Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004488 |
| length | 1026 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 1 |
| gene id | XLOC_002368 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 40561692 ~ 40562717 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0001594 | trace-amine receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060413-2 | Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000147757 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005732 | lncRNA | upstream | 25166 | 40535862 ~ 40536526 (+) | True | XLOC_002364 |
| TCONS_00005937 | lncRNA | upstream | 280690 | 40274258 ~ 40281002 (+) | True | XLOC_002361 |
| TCONS_00005935 | lncRNA | upstream | 362860 | 40122374 ~ 40198832 (+) | False | XLOC_002361 |
| TCONS_00005936 | lncRNA | upstream | 427287 | 40122599 ~ 40134405 (+) | False | XLOC_002361 |
| TCONS_00005934 | lncRNA | upstream | 644184 | 39909138 ~ 39917508 (+) | True | XLOC_002359 |
| TCONS_00005733 | lncRNA | downstream | 67113 | 40629830 ~ 40630494 (+) | True | XLOC_002378 |
| TCONS_00004529 | lncRNA | downstream | 376947 | 40939664 ~ 40964812 (+) | True | XLOC_002406 |
| TCONS_00004545 | lncRNA | downstream | 1388483 | 41951200 ~ 41954185 (+) | True | XLOC_002416 |
| TCONS_00005938 | lncRNA | downstream | 1420280 | 41982997 ~ 41986283 (+) | True | XLOC_002417 |
| TCONS_00004551 | lncRNA | downstream | 1795894 | 42358611 ~ 42361347 (+) | False | XLOC_002421 |
| TCONS_00004485 | mRNA | upstream | 12051 | 40548616 ~ 40549641 (+) | True | XLOC_002365 |
| TCONS_00004484 | mRNA | upstream | 232703 | 40324395 ~ 40328989 (+) | True | XLOC_002363 |
| TCONS_00004483 | mRNA | upstream | 232869 | 40321067 ~ 40328823 (+) | False | XLOC_002363 |
| TCONS_00004482 | mRNA | upstream | 244213 | 40284003 ~ 40317479 (+) | True | XLOC_002362 |
| TCONS_00004481 | mRNA | upstream | 244218 | 40284003 ~ 40317474 (+) | False | XLOC_002362 |
| TCONS_00004489 | mRNA | downstream | 6018 | 40568735 ~ 40569766 (+) | True | XLOC_002369 |
| TCONS_00004490 | mRNA | downstream | 15615 | 40578332 ~ 40579363 (+) | True | XLOC_002370 |
| TCONS_00004491 | mRNA | downstream | 21213 | 40583930 ~ 40584955 (+) | True | XLOC_002371 |
| TCONS_00004492 | mRNA | downstream | 36074 | 40598791 ~ 40599801 (+) | True | XLOC_002372 |
| TCONS_00004494 | mRNA | downstream | 43367 | 40606084 ~ 40607106 (+) | True | XLOC_002374 |
| TCONS_00004487 | other | upstream | 6561 | 40554917 ~ 40555131 (+) | True | XLOC_002367 |
| TCONS_00004486 | other | upstream | 10738 | 40550730 ~ 40550954 (+) | True | XLOC_002366 |
| TCONS_00004473 | other | upstream | 800813 | 39760754 ~ 39760879 (+) | True | XLOC_002356 |
| TCONS_00004472 | other | upstream | 862205 | 39692377 ~ 39699487 (+) | True | XLOC_002355 |
| TCONS_00004447 | other | upstream | 1877912 | 38683666 ~ 38683780 (+) | True | XLOC_002342 |
| TCONS_00004493 | other | downstream | 37218 | 40599935 ~ 40600502 (+) | True | XLOC_002373 |
| TCONS_00004495 | other | downstream | 44984 | 40607701 ~ 40608717 (+) | True | XLOC_002375 |
| TCONS_00004496 | other | downstream | 46744 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004501 | other | downstream | 76059 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004521 | other | downstream | 185156 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
