Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049060 |
| length | 982 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | XLOC_024236 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007136.7 |
| NCBI id | CM002909.2 |
| chromosome length | 37502051 |
| location | 33501345 ~ 33503564 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042737 | drug catabolic process | biological_process |
| GO:0009072 | aromatic amino acid family metabolic process | biological_process |
| GO:0009074 | aromatic amino acid family catabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0044282 | small molecule catabolic process | biological_process |
| GO:0006570 | tyrosine metabolic process | biological_process |
| GO:0006572 | tyrosine catabolic process | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| GO:0003868 | 4-hydroxyphenylpyruvate dioxygenase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00049271 | lncRNA | upstream | 61725 | 33407120 ~ 33439620 (+) | True | XLOC_024235 |
| TCONS_00049270 | lncRNA | upstream | 152610 | 33344794 ~ 33348735 (+) | True | XLOC_024234 |
| TCONS_00049059 | lncRNA | upstream | 465241 | 33029618 ~ 33036104 (+) | True | XLOC_024229 |
| TCONS_00049267 | lncRNA | upstream | 1997876 | 31497318 ~ 31503469 (+) | False | XLOC_024218 |
| TCONS_00049061 | lncRNA | downstream | 102037 | 33605601 ~ 33609953 (+) | True | XLOC_024237 |
| TCONS_00049062 | lncRNA | downstream | 531939 | 34035503 ~ 34036111 (+) | False | XLOC_024243 |
| TCONS_00048036 | lncRNA | downstream | 531939 | 34035503 ~ 34050402 (+) | False | XLOC_024243 |
| TCONS_00048037 | lncRNA | downstream | 539716 | 34043280 ~ 34043756 (+) | True | XLOC_024243 |
| TCONS_00049063 | lncRNA | downstream | 551192 | 34054756 ~ 34138343 (+) | False | XLOC_024244 |
| TCONS_00048027 | mRNA | upstream | 234792 | 33256012 ~ 33266553 (+) | True | XLOC_024233 |
| TCONS_00048026 | mRNA | upstream | 251022 | 33202294 ~ 33250323 (+) | True | XLOC_024232 |
| TCONS_00048025 | mRNA | upstream | 256502 | 33201727 ~ 33244843 (+) | False | XLOC_024232 |
| TCONS_00048024 | mRNA | upstream | 260601 | 33201727 ~ 33240744 (+) | False | XLOC_024232 |
| TCONS_00048023 | mRNA | upstream | 264012 | 33192935 ~ 33237333 (+) | False | XLOC_024232 |
| TCONS_00048030 | mRNA | downstream | 346083 | 33849647 ~ 33963212 (+) | False | XLOC_024240 |
| TCONS_00048031 | mRNA | downstream | 436164 | 33939728 ~ 33969717 (+) | True | XLOC_024240 |
| TCONS_00048032 | mRNA | downstream | 468455 | 33972019 ~ 34009675 (+) | False | XLOC_024241 |
| TCONS_00048033 | mRNA | downstream | 468589 | 33972153 ~ 34008525 (+) | True | XLOC_024241 |
| TCONS_00048034 | mRNA | downstream | 509529 | 34013093 ~ 34027379 (+) | False | XLOC_024242 |
| TCONS_00048019 | other | upstream | 362145 | 33139075 ~ 33139200 (+) | True | XLOC_024231 |
| TCONS_00048011 | other | upstream | 889906 | 32582740 ~ 32611439 (+) | True | XLOC_024226 |
| TCONS_00047980 | other | upstream | 2519898 | 30981333 ~ 30981447 (+) | True | XLOC_024208 |
| TCONS_00047979 | other | upstream | 2529385 | 30971844 ~ 30971960 (+) | True | XLOC_024207 |
| TCONS_00047974 | other | upstream | 3163356 | 30316839 ~ 30337989 (+) | True | XLOC_024200 |
| TCONS_00048028 | other | downstream | 225720 | 33729284 ~ 33729398 (+) | True | XLOC_024238 |
| TCONS_00048029 | other | downstream | 276949 | 33780513 ~ 33780628 (+) | True | XLOC_024239 |
| TCONS_00048052 | other | downstream | 1271994 | 34775558 ~ 34789619 (+) | True | XLOC_024253 |
| TCONS_00048053 | other | downstream | 1287798 | 34791362 ~ 34791466 (+) | True | XLOC_024254 |
| TCONS_00048100 | other | downstream | 2377851 | 35881415 ~ 35881531 (+) | True | XLOC_024292 |
