Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1883540 |
| length | 957 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110498259 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 61700705 ~ 61707803 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1883543 | lncRNA | upstream | 280 | 61705542 ~ 61706509 (+) | False | LOC110498259 |
| TU1883541 | lncRNA | upstream | 280 | 61705610 ~ 61706509 (+) | False | LOC110498259 |
| TU1883536 | lncRNA | upstream | 280 | 61705670 ~ 61706509 (+) | False | LOC110498259 |
| TU1883531 | lncRNA | upstream | 47717 | 61658381 ~ 61659072 (+) | True | G1646303 |
| TU1883519 | lncRNA | upstream | 96432 | 61595114 ~ 61610357 (+) | True | G1646296 |
| TU1883558 | lncRNA | downstream | 1402 | 61709147 ~ 61709382 (+) | True | G1646316 |
| TU1883559 | lncRNA | downstream | 1645 | 61709390 ~ 61709626 (+) | True | G1646317 |
| TU1883560 | lncRNA | downstream | 3213 | 61710958 ~ 61711183 (+) | True | G1646318 |
| TU1883562 | lncRNA | downstream | 3872 | 61711617 ~ 61711849 (+) | True | G1646320 |
| TU1883564 | lncRNA | downstream | 7769 | 61715514 ~ 61721080 (+) | False | G1646322 |
| XM_036955297.1 | mRNA | upstream | 646 | 61700705 ~ 61706143 (+) | False | LOC110498259 |
| XM_036955279.1 | mRNA | upstream | 277332 | 61421677 ~ 61429457 (+) | False | LOC118941510 |
| XM_036955280.1 | mRNA | upstream | 277332 | 61421677 ~ 61429457 (+) | False | LOC118941510 |
| XM_036955281.1 | mRNA | upstream | 291734 | 61407642 ~ 61415055 (+) | False | LOC118941510 |
| XM_036955298.1 | mRNA | downstream | 38393 | 61746138 ~ 61852881 (+) | False | trim9 |
| XM_036955299.1 | mRNA | downstream | 38393 | 61746138 ~ 61852881 (+) | False | trim9 |
| XM_036955300.1 | mRNA | downstream | 38532 | 61746277 ~ 61852881 (+) | False | trim9 |
| XM_036955301.1 | mRNA | downstream | 38532 | 61746277 ~ 61852881 (+) | True | trim9 |
| XM_036955307.1 | mRNA | downstream | 155892 | 61863637 ~ 61898665 (+) | False | pygl |
| TU1883513 | other | upstream | 145705 | 61558041 ~ 61561084 (+) | True | G1646294 |
| TU1883395 | other | upstream | 361635 | 61344787 ~ 61345154 (+) | True | G1646225 |
| TU1883202 | other | upstream | 414948 | 61279819 ~ 61291841 (+) | False | LOC110498404 |
| TU1883226 | other | upstream | 503437 | 61202358 ~ 61203352 (+) | True | G1646089 |
| TU1882392 | other | upstream | 967832 | 60728557 ~ 60738957 (+) | True | G1645444 |
| TU1883836 | other | downstream | 436438 | 62144183 ~ 62145290 (+) | True | G1646509 |
| TU1883744 | other | downstream | 779256 | 62487001 ~ 62493719 (+) | True | srsf5a |
| TU1884898 | other | downstream | 1309210 | 63016955 ~ 63018688 (+) | True | G1647342 |
| TU1884975 | other | downstream | 1367404 | 63075149 ~ 63077143 (+) | True | G1647411 |
| TU1885075 | other | downstream | 1495011 | 63202756 ~ 63204057 (+) | False | G1647477 |
