Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00052366 |
| length | 861 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 8 |
| gene id | XLOC_025640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 42490459 ~ 42497766 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| GO:0017171 | serine hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00050488 | lncRNA | upstream | 283527 | 42194210 ~ 42206974 (+) | False | XLOC_025639 |
| TCONS_00050489 | lncRNA | upstream | 283527 | 42203476 ~ 42206974 (+) | True | XLOC_025639 |
| TCONS_00052754 | lncRNA | upstream | 527755 | 41954893 ~ 41962746 (+) | True | XLOC_025636 |
| TCONS_00052753 | lncRNA | upstream | 1424087 | 41043023 ~ 41066414 (+) | True | XLOC_025629 |
| TCONS_00052752 | lncRNA | upstream | 1541502 | 40945040 ~ 40948999 (+) | True | XLOC_025628 |
| TCONS_00052756 | lncRNA | downstream | 9716 | 42507482 ~ 42509830 (+) | False | XLOC_025642 |
| TCONS_00052367 | lncRNA | downstream | 10064 | 42507830 ~ 42509830 (+) | True | XLOC_025642 |
| TCONS_00052757 | lncRNA | downstream | 256891 | 42754657 ~ 42755168 (+) | True | XLOC_025643 |
| TCONS_00050497 | lncRNA | downstream | 604244 | 43102010 ~ 43135493 (+) | False | XLOC_025648 |
| TCONS_00052758 | lncRNA | downstream | 702551 | 43200317 ~ 43202750 (+) | False | XLOC_025649 |
| TCONS_00050487 | mRNA | upstream | 361436 | 42126062 ~ 42129065 (+) | True | XLOC_025638 |
| TCONS_00050485 | mRNA | upstream | 370329 | 42090418 ~ 42120172 (+) | False | XLOC_025637 |
| TCONS_00050486 | mRNA | upstream | 370636 | 42090464 ~ 42119865 (+) | True | XLOC_025637 |
| TCONS_00050483 | mRNA | upstream | 563632 | 41917499 ~ 41926869 (+) | False | XLOC_025635 |
| TCONS_00050490 | mRNA | downstream | 48 | 42497814 ~ 42504515 (+) | True | XLOC_025641 |
| TCONS_00050491 | mRNA | downstream | 421080 | 42918846 ~ 42920062 (+) | True | XLOC_025644 |
| TCONS_00050492 | mRNA | downstream | 425509 | 42923275 ~ 42957609 (+) | True | XLOC_025645 |
| TCONS_00050493 | mRNA | downstream | 501511 | 42999277 ~ 43060971 (+) | False | XLOC_025646 |
| TCONS_00050494 | mRNA | downstream | 502078 | 42999844 ~ 43060800 (+) | True | XLOC_025646 |
| TCONS_00050475 | other | upstream | 989976 | 41500409 ~ 41500525 (+) | True | XLOC_025630 |
| TCONS_00050468 | other | upstream | 1695622 | 40792230 ~ 40794879 (+) | True | XLOC_025623 |
| TCONS_00050467 | other | upstream | 1695661 | 40791746 ~ 40794840 (+) | False | XLOC_025623 |
| TCONS_00050466 | other | upstream | 1696949 | 40791746 ~ 40793552 (+) | False | XLOC_025623 |
| TCONS_00050465 | other | upstream | 1697513 | 40791746 ~ 40792988 (+) | False | XLOC_025623 |
| TCONS_00050499 | other | downstream | 876129 | 43373895 ~ 43384178 (+) | False | XLOC_025650 |
| TCONS_00050506 | other | downstream | 1216933 | 43714699 ~ 43714783 (+) | True | XLOC_025655 |
| TCONS_00050507 | other | downstream | 1219061 | 43716827 ~ 43716915 (+) | True | XLOC_025656 |
| TCONS_00050515 | other | downstream | 2390271 | 44888037 ~ 44888153 (+) | True | XLOC_025662 |
| TCONS_00050528 | other | downstream | 3137311 | 45635077 ~ 45635186 (+) | True | XLOC_025668 |
