RNA id: TU91283


Basic Information

Item Value
RNA id TU91283
length 2943
RNA type TUCP
GC content 0.45
exon number 10
gene id anxa1a
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41135777 ~ 41270849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttagttactagttactttagttactccactacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactccgctacattcacctgttacagctttagttactttagttactccactactttcatctgttacagctttagttactttagttactccactactttcatctgttacagctttagttactttagttactccactacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactgccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacatttatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagtaactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactcctgcTTTAGTTAGTCAGGCATatcaggacatagcagggcgttTTCAATGCAGAACTTTAACTAGTACCAGAGTATtataacagtgtggtattagtaccagtgtggtattagtactttaactAGTACCAGAGTATtataacagtgtggtattagtaccagtgtggtattagtactttaaaTTGTACCAGAGTATTATAacagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtaccagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtaccagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtactagtACTCTGTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCGGCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACATGTGGTCCTCTGATTGCAGTTTTCGAGCGGTACTCCAAGTACAGCAAAGTGGACGTGTCCAAAGCCATCGACCTGGAGATGAAGGGAGACATCGAGAGCTGTCTCACCGCCGTAGTGAAGTGTGCTGGGAGCCGGCCGGCCTTCTTCGCTGAGAAGCTCTACTTGTCCATGAAGGGTAAAGGAACCCGAAAACACACCCTGACCCGCATCATGGTGAGCCGCTCGGAGGTCGACCTGAAACGGATCAAGGACGAGTACAAGAAGGCCTACGGAAAAACCCTGTACCAGGACAttctggtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacagagagacacacacacacacacacacacagacacagacacacacacacagacacacagacacacacacacagacacagacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacagacacagacacagacacacacagacacacacacacacagacacacacacacacacagacgcacacacacacacacagacacacacacagacacagacacacacacacagacacacagacacagacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacagacacagacacagacacacacagacacacacacacacacacagacacacacacacacacacagacacagacacagacacacacagacacacacacagacacacacacacagacacacacacacagacacagacacacacacagacacacacacagagacaaacacactcacacacacacacacacacagagacacacacacacagagacacacacacaaagagacatatacacacacacacacacacacacacacacacagacacagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91270 lncRNA upstream 66339 41132183 ~ 41141445 (+) True G68332
TU91269 lncRNA upstream 75241 41132183 ~ 41132543 (+) False G68332
TU91268 lncRNA upstream 112566 41094858 ~ 41095218 (+) False LOC120561096
TU91237 lncRNA upstream 137135 41061839 ~ 41070649 (+) False G68309
TU91260 lncRNA upstream 165847 41041367 ~ 41041937 (+) True G68325
TU91312 lncRNA downstream 104234 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA downstream 104234 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA downstream 117091 41379441 ~ 41400573 (+) True G68349
TU91306 lncRNA downstream 118418 41380768 ~ 41400573 (+) False G68349
TU91329 lncRNA downstream 158589 41420939 ~ 41484804 (+) True G68356
XM_039804052.1 mRNA upstream 109988 41081607 ~ 41097796 (+) True LOC120561096
XM_039802430.1 mRNA upstream 136878 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA upstream 136878 41054751 ~ 41070906 (+) True rorb
XM_039802428.1 mRNA upstream 260975 40891729 ~ 40946809 (+) True trpm6
XM_039802427.1 mRNA upstream 324225 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039804053.1 mRNA downstream 4297 41266647 ~ 41267519 (+) True LOC120561097
XM_039802520.1 mRNA downstream 335877 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 347582 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 368386 41630736 ~ 41635889 (+) True LOC120560213
XM_039802487.1 mRNA downstream 378980 41641330 ~ 41654650 (+) True LOC120560214
TU91293 other upstream 405 41193258 ~ 41207379 (+) False anxa1a
TU91239 other upstream 169046 41024999 ~ 41038738 (+) True G68309
TU91230 other upstream 257806 40944533 ~ 40949978 (+) False trpm6
TU91231 other upstream 257806 40949520 ~ 40949978 (+) False trpm6
TU91208 other upstream 310676 40867247 ~ 40897108 (+) True G68285
TU91301 other downstream 4376 41266726 ~ 41267474 (+) False LOC120561097
TU91319 other downstream 104234 41366584 ~ 41400573 (+) False G68349
TU91431 other downstream 458663 41721013 ~ 41756128 (+) False aebp1b
TU91472 other downstream 647474 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 670213 41932563 ~ 41934316 (+) False LOC120561105

Expression Profile