RNA id: TU91514


Basic Information

Item Value
RNA id TU91514
length 304
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G68451
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42039864 ~ 42140064 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtatgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtggcgcgtgctggtgctgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgggtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91512 lncRNA upstream 399 42039068 ~ 42039465 (+) True G68449
TU91486 lncRNA upstream 31566 42003362 ~ 42008298 (+) False G68433
TU91492 lncRNA upstream 31566 42003362 ~ 42008298 (+) False G68433
TU91488 lncRNA upstream 31566 42003573 ~ 42008298 (+) False G68433
TU91494 lncRNA upstream 31566 42003573 ~ 42008298 (+) False G68433
TU91508 lncRNA downstream 934 42043601 ~ 42043878 (+) True G68447
TU91515 lncRNA downstream 2342 42045009 ~ 42089922 (+) False G68451
TU91537 lncRNA downstream 47374 42090041 ~ 42090526 (+) True G68463
TU91546 lncRNA downstream 65042 42107709 ~ 42112264 (+) False G68472
TU91548 lncRNA downstream 65042 42107709 ~ 42112264 (+) False G68472
XM_039804058.1 mRNA upstream 101574 41932857 ~ 41938290 (+) False LOC120561105
XM_039802450.1 mRNA upstream 107668 41889339 ~ 41932196 (+) True npc1l1
XM_039804055.1 mRNA upstream 246953 41720800 ~ 41792911 (+) True aebp1b
XM_039802491.1 mRNA upstream 328658 41707504 ~ 41711206 (+) True LOC120560218
XM_039802489.1 mRNA upstream 337364 41699362 ~ 41702500 (+) True LOC120560215
XM_039804061.1 mRNA downstream 10754 42053421 ~ 42070713 (+) True LOC120561109
XM_039802517.1 mRNA downstream 97916 42140583 ~ 42147455 (+) True LOC120560236
XM_039802512.1 mRNA downstream 107964 42150631 ~ 42158948 (+) True LOC120560233
XM_039802435.1 mRNA downstream 175495 42218162 ~ 42240929 (+) True LOC120560192
XM_039802436.1 mRNA downstream 175495 42218162 ~ 42240929 (+) False LOC120560192
TU91472 other upstream 33903 41909824 ~ 42005961 (+) True G68429
TU91474 other upstream 105548 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other upstream 105548 41932563 ~ 41934316 (+) False LOC120561105
TU91431 other upstream 283736 41721013 ~ 41756128 (+) False aebp1b
TU91319 other upstream 639291 41366584 ~ 41400573 (+) False G68349
TU91611 other downstream 279806 42322473 ~ 42396643 (+) True G68504
TU91750 other downstream 921373 42964040 ~ 42965620 (+) False G68598
TU91748 other downstream 933479 42976146 ~ 42998262 (+) True LOC120561116
TU91740 other downstream 951111 42993778 ~ 42998262 (+) False LOC120561116
TU91783 other downstream 982631 43025298 ~ 43031225 (+) False entr1

Expression Profile