RNA id: TU91494


Basic Information

Item Value
RNA id TU91494
length 339
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G68433
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41943696 ~ 42008298 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtctgtgtgcgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtctctgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtctgtctgtgtgtgtctctgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91502 lncRNA upstream 5328 41995671 ~ 41998245 (+) True G68441
TU91359 lncRNA upstream 9870 41987822 ~ 41993703 (+) True G68367
TU91356 lncRNA upstream 10083 41954704 ~ 41993490 (+) True G68364
XR_005639464.1 lncRNA upstream 16516 41978113 ~ 41987057 (+) True LOC120560257
TU91354 lncRNA upstream 27542 41967600 ~ 41976031 (+) True G68362
TU91509 lncRNA downstream 15955 42024253 ~ 42043878 (+) False G68447
TU91512 lncRNA downstream 30770 42039068 ~ 42039465 (+) True G68449
TU91514 lncRNA downstream 31566 42039864 ~ 42042667 (+) True G68451
TU91516 lncRNA downstream 31566 42039864 ~ 42140064 (+) False G68451
TU91508 lncRNA downstream 35303 42043601 ~ 42043878 (+) True G68447
XM_039804058.1 mRNA upstream 65283 41932857 ~ 41938290 (+) False LOC120561105
XM_039802450.1 mRNA upstream 71377 41889339 ~ 41932196 (+) True npc1l1
XM_039804055.1 mRNA upstream 210662 41720800 ~ 41792911 (+) True aebp1b
XM_039802491.1 mRNA upstream 292367 41707504 ~ 41711206 (+) True LOC120560218
XM_039802489.1 mRNA upstream 301073 41699362 ~ 41702500 (+) True LOC120560215
XM_039804061.1 mRNA downstream 45123 42053421 ~ 42070713 (+) True LOC120561109
XM_039802517.1 mRNA downstream 132285 42140583 ~ 42147455 (+) True LOC120560236
XM_039802512.1 mRNA downstream 142333 42150631 ~ 42158948 (+) True LOC120560233
XM_039802435.1 mRNA downstream 209864 42218162 ~ 42240929 (+) True LOC120560192
XM_039802436.1 mRNA downstream 209864 42218162 ~ 42240929 (+) False LOC120560192
TU91474 other upstream 69257 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other upstream 69257 41932563 ~ 41934316 (+) False LOC120561105
TU91431 other upstream 247445 41721013 ~ 41756128 (+) False aebp1b
TU91319 other upstream 603000 41366584 ~ 41400573 (+) False G68349
TU91301 other upstream 736099 41266726 ~ 41267474 (+) False LOC120561097
TU91611 other downstream 314175 42322473 ~ 42396643 (+) True G68504
TU91750 other downstream 955742 42964040 ~ 42965620 (+) False G68598
TU91748 other downstream 967848 42976146 ~ 42998262 (+) True LOC120561116
TU91740 other downstream 985480 42993778 ~ 42998262 (+) False LOC120561116
TU91783 other downstream 1017000 43025298 ~ 43031225 (+) False entr1

Expression Profile