Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313823.1 |
| length | 1325 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | ahsa1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 19207134 ~ 19213951 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006950 | response to stress | biological_process |
| GO:0048702 | embryonic neurocranium morphogenesis | biological_process |
| GO:0051087 | chaperone binding | molecular_function |
| GO:0001671 | ATPase activator activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU353231 | lncRNA | downstream | 118479 | 19088101 ~ 19088655 (-) | True | G298309 |
| TU353202 | lncRNA | downstream | 140202 | 19002340 ~ 19066932 (-) | False | G298286 |
| TU353203 | lncRNA | downstream | 140202 | 19002340 ~ 19066932 (-) | True | G298286 |
| TU353141 | lncRNA | downstream | 376843 | 18829534 ~ 18830291 (-) | True | G298243 |
| TU352819 | lncRNA | downstream | 645300 | 18561597 ~ 18561834 (-) | True | G297969 |
| TU353274 | lncRNA | upstream | 2687 | 19216638 ~ 19217239 (-) | True | G298349 |
| TU353275 | lncRNA | upstream | 5166 | 19219117 ~ 19219681 (-) | True | G298350 |
| TU353288 | lncRNA | upstream | 12448 | 19226399 ~ 19226685 (-) | True | G298358 |
| TU353336 | lncRNA | upstream | 111546 | 19325497 ~ 19325707 (-) | True | G298400 |
| TU353390 | lncRNA | upstream | 144119 | 19358070 ~ 19567558 (-) | True | G298436 |
| XM_026948138.2 | mRNA | downstream | 2042 | 19186674 ~ 19205092 (-) | True | sel1l |
| XM_026948121.2 | mRNA | downstream | 23519 | 19171017 ~ 19183615 (-) | True | si:dkey-177p2.18 |
| XM_034313487.1 | mRNA | downstream | 43559 | 19139086 ~ 19163575 (-) | False | chga |
| XM_034313486.1 | mRNA | downstream | 43559 | 19139086 ~ 19163575 (-) | True | chga |
| XM_026948142.2 | mRNA | downstream | 113727 | 19089576 ~ 19093407 (-) | False | tmem251 |
| XM_026948156.2 | mRNA | upstream | 7057 | 19221008 ~ 19230373 (-) | True | si:dkey-177p2.6 |
| XM_026948139.2 | mRNA | upstream | 18244 | 19232195 ~ 19239317 (-) | True | cdca4 |
| XM_026948140.2 | mRNA | upstream | 19394 | 19233345 ~ 19239311 (-) | False | cdca4 |
| XM_034313940.1 | mRNA | upstream | 64040 | 19277991 ~ 19298028 (-) | True | LOC113547703 |
| XM_026948105.2 | mRNA | upstream | 100776 | 19314727 ~ 19321490 (-) | True | LOC113547659 |
| TU353207 | other | downstream | 123669 | 19078004 ~ 19083465 (-) | False | ubr7 |
| XR_003404857.2 | other | downstream | 1101141 | 18075362 ~ 18105993 (-) | False | dpf3 |
| TU352481 | other | downstream | 1491890 | 17707286 ~ 17715244 (-) | False | acot20 |
| TU351727 | other | downstream | 2160324 | 17043313 ~ 17046810 (-) | False | ttc32 |
| TU351457 | other | downstream | 2649207 | 16555476 ~ 16557927 (-) | True | G296802 |
| LOC113547697 | other | upstream | 51876 | 19265827 ~ 19267009 (-) | True | LOC113547697 |
| TU353415 | other | upstream | 177048 | 19390999 ~ 19391487 (-) | False | LOC113525604 |
| XR_004580086.1 | other | upstream | 234442 | 19448393 ~ 19451604 (-) | False | LOC113524711 |
| LOC113524722 | other | upstream | 258069 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
| TU353447 | other | upstream | 377008 | 19590959 ~ 19591437 (-) | True | G298475 |
