Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-uuc_5 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | trnae-uuc_5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20309289 ~ 20309360 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU353863 | lncRNA | downstream | 61374 | 20247235 ~ 20247915 (-) | True | G298758 |
| TU353862 | lncRNA | downstream | 62887 | 20243428 ~ 20246402 (-) | True | G298757 |
| TU353857 | lncRNA | downstream | 72055 | 20236928 ~ 20237234 (-) | True | G298752 |
| XR_004580091.1 | lncRNA | downstream | 118645 | 20190083 ~ 20190644 (-) | True | LOC117599709 |
| XR_004580094.1 | lncRNA | downstream | 125715 | 20183058 ~ 20183574 (-) | True | LOC117599712 |
| TU353886 | lncRNA | upstream | 55925 | 20365285 ~ 20365496 (-) | True | trnah-gug_23 |
| TU353904 | lncRNA | upstream | 79724 | 20389084 ~ 20389700 (-) | False | G298794 |
| TU353905 | lncRNA | upstream | 80774 | 20390134 ~ 20390717 (-) | True | G298794 |
| TU353913 | lncRNA | upstream | 120154 | 20429514 ~ 20430208 (-) | True | G298801 |
| TU353941 | lncRNA | upstream | 182649 | 20492009 ~ 20501140 (-) | True | G298823 |
| XM_034313541.1 | mRNA | downstream | 5542 | 20293412 ~ 20303747 (-) | True | gtf2a1 |
| XM_026911127.2 | mRNA | downstream | 29444 | 20276967 ~ 20279845 (-) | True | nfkbiaa |
| XM_026909974.2 | mRNA | downstream | 159816 | 20147871 ~ 20149473 (-) | True | LOC113523908 |
| XM_034313569.1 | mRNA | downstream | 202044 | 20105758 ~ 20107245 (-) | True | LOC117599697 |
| XM_034313602.1 | mRNA | downstream | 378036 | 19924626 ~ 19931253 (-) | True | LOC117599719 |
| XM_026911126.2 | mRNA | upstream | 83280 | 20392640 ~ 20403559 (-) | True | LOC113524770 |
| XM_026911108.2 | mRNA | upstream | 115925 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| XM_026911106.2 | mRNA | upstream | 115925 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| XM_026911107.2 | mRNA | upstream | 115925 | 20425285 ~ 20437474 (-) | True | LOC113524747 |
| XM_034313575.1 | mRNA | upstream | 130260 | 20439620 ~ 20442292 (-) | True | LOC117599698 |
| TU353574 | other | downstream | 368290 | 19884160 ~ 19940999 (-) | False | G298543 |
| TU353585 | other | downstream | 423494 | 19884807 ~ 19885795 (-) | True | G298543 |
| XR_004580096.1 | other | downstream | 597238 | 19711647 ~ 19712051 (-) | True | LOC117599714 |
| TU353447 | other | downstream | 717852 | 19590959 ~ 19591437 (-) | True | G298475 |
| LOC113524722 | other | downstream | 835313 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
| trnar-acg_12 | other | upstream | 160 | 20309520 ~ 20309592 (-) | True | trnar-acg_12 |
| trnah-gug_15 | other | upstream | 1448 | 20310808 ~ 20310879 (-) | True | trnah-gug_15 |
| trnar-acg_15 | other | upstream | 25363 | 20334723 ~ 20334795 (-) | True | trnar-acg_15 |
| trnah-gug_19 | other | upstream | 27684 | 20337044 ~ 20337115 (-) | True | trnah-gug_19 |
| trnae-uuc_9 | other | upstream | 28353 | 20337713 ~ 20337784 (-) | True | trnae-uuc_9 |
