RNA id: TCONS_00007665


Basic Information

Item Value
RNA id TCONS_00007665
length 261
RNA type mRNA
GC content 0.30
exon number 12
gene id XLOC_004020
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12703523 ~ 12739532 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGACTTTTTTAATACTCTTTAATAAACAGGGTAAGTTGCAGTTGCAATactggttcaagcctctgctgatcaaaaacaaaaataatgtcacCCGTCCAATgtttcaaacctatCTGAAGCGTCAGCCAATAATGGacactttcaagctttggagacTATTCAAGTTCATATACAAAAGAAATGattcaatatatttctgtctaagTATTTCTGATAGttcaaattctttaattgtattaataattatacattttataatg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000183734

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008772 lncRNA downstream 212244 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA downstream 238114 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA downstream 239037 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00008771 lncRNA downstream 273414 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00007602 lncRNA downstream 483554 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007692 lncRNA upstream 1058921 13798453 ~ 13800802 (-) False XLOC_004032
TCONS_00008775 lncRNA upstream 1058960 13798492 ~ 13800113 (-) False XLOC_004032
TCONS_00007693 lncRNA upstream 1060144 13799676 ~ 13800802 (-) True XLOC_004032
TCONS_00008776 lncRNA upstream 1408131 14147663 ~ 14148426 (-) True XLOC_004034
TCONS_00008777 lncRNA upstream 1569365 14308897 ~ 14311083 (-) False XLOC_004035
TCONS_00007662 mRNA downstream 12984 12688642 ~ 12690539 (-) False XLOC_004018
TCONS_00007663 mRNA downstream 13130 12689047 ~ 12690393 (-) True XLOC_004018
TCONS_00007661 mRNA downstream 29886 12672330 ~ 12673637 (-) True XLOC_004017
TCONS_00007659 mRNA downstream 69506 12632395 ~ 12634017 (-) False XLOC_004016
TCONS_00007660 mRNA downstream 69506 12632705 ~ 12634017 (-) True XLOC_004016
TCONS_00007674 mRNA upstream 42764 12782296 ~ 12802123 (-) False XLOC_004025
TCONS_00007675 mRNA upstream 45794 12785326 ~ 12800945 (-) False XLOC_004025
TCONS_00007676 mRNA upstream 45794 12785326 ~ 12801157 (-) True XLOC_004025
TCONS_00007677 mRNA upstream 242728 12982260 ~ 12998400 (-) True XLOC_004026
TCONS_00007678 mRNA upstream 354647 13094179 ~ 13107106 (-) False XLOC_004027
TCONS_00007664 other downstream 11832 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 81756 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 112227 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007648 other downstream 190261 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007645 other downstream 203261 12499966 ~ 12500262 (-) True XLOC_004006
TCONS_00007673 other upstream 16611 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007689 other upstream 743139 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007741 other upstream 3278351 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 3281397 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 3318659 16058191 ~ 16058307 (-) True XLOC_004059