RNA id: TCONS_00007660


Basic Information

Item Value
RNA id TCONS_00007660
length 525
RNA type mRNA
GC content 0.52
exon number 5
gene id XLOC_004016
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12632395 ~ 12634017 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTCTTGTGTTCATTACAGGTTTCAGAGTCGACTCACCTACGACTCGCTCCAGTTTGAGGGCCTCAACATCACTGTGGGAGAGCTGAAGCGGCAGATCATGAGGCGCGAGAGGCTGAAGTTCTGCCAGCTGAAGATAAGCAAAGGCCAAACTGATGAAGaataCACAGATGATGATGCTCTCATCCCCAAAAACACATCTGTCATCATCAGACGGGTCCCTGCGGCTGGACTGAAGTCCTCCAACAGAAGATTTGTTGGacatcaagctGGACCATCAGCTAAATCTTCTCAAACAGGTGATTCTTCACTCCTCTCACTGGAGCAGCTGTTGAAGactgagaatttggctgaggcaaaggcatcagaggaggacaagctaaaagcggtgatgtaccagtccagtctgtgctactactccagcagggcagcagctctgctccGCACAAGCGCATCAggaggagcacagggattccCCGCAGCTTCCTGTTGGAGGTGGACGACCCAAACCGAAAGGGAGTCATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193090

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008772 lncRNA downstream 141426 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA downstream 167296 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA downstream 168219 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00008771 lncRNA downstream 202596 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00007602 lncRNA downstream 412736 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007671 lncRNA upstream 100114 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007672 lncRNA upstream 105159 12739176 ~ 12741136 (-) True XLOC_004023
TCONS_00007692 lncRNA upstream 1164436 13798453 ~ 13800802 (-) False XLOC_004032
TCONS_00008775 lncRNA upstream 1164475 13798492 ~ 13800113 (-) False XLOC_004032
TCONS_00007693 lncRNA upstream 1165659 13799676 ~ 13800802 (-) True XLOC_004032
TCONS_00007657 mRNA downstream 12916 12610576 ~ 12619789 (-) True XLOC_004014
TCONS_00007655 mRNA downstream 42757 12588634 ~ 12589948 (-) True XLOC_004012
TCONS_00007654 mRNA downstream 59025 12572306 ~ 12573680 (-) True XLOC_004011
TCONS_00007652 mRNA downstream 83764 12547289 ~ 12548941 (-) False XLOC_004010
TCONS_00007661 mRNA upstream 38313 12672330 ~ 12673637 (-) True XLOC_004017
TCONS_00007662 mRNA upstream 54625 12688642 ~ 12690539 (-) False XLOC_004018
TCONS_00007663 mRNA upstream 55030 12689047 ~ 12690393 (-) True XLOC_004018
TCONS_00007665 mRNA upstream 69506 12703523 ~ 12739532 (-) True XLOC_004020
TCONS_00007666 mRNA upstream 69870 12703887 ~ 12705754 (-) False XLOC_004021
TCONS_00007658 other downstream 10938 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 41409 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007648 other downstream 119443 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007645 other downstream 132443 12499966 ~ 12500262 (-) True XLOC_004006
TCONS_00007634 other downstream 194325 12438084 ~ 12438380 (-) True XLOC_004000
TCONS_00007664 other upstream 57378 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007673 other upstream 122126 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007689 other upstream 848654 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007741 other upstream 3383866 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 3386912 16020929 ~ 16021471 (-) True XLOC_004058

Expression Profile

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