RNA id: TCONS_00007703



Basic Information


Item Value
RNA id TCONS_00007703
length 1158
RNA type mRNA
GC content 0.36
exon number 5
gene id XLOC_004043
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 14915780 ~ 14924138 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTTTTATTAGCCTGACTGGAAGATACATGACAGCCCTGTGGCATCAACATGTTTTTTCGAGACCTAacagttgtaatttattttgtatacTTTTTATGCAATTCACCTTTAATCAAATTGAGTTTATTTTGCTTACAAATAGTTTTACCTGCACGCAAAAGGGGTCAGTCGAAAAATCCATCAAGCTTATCAGGTGTTCTACCAATTTGTAAGAAGCCTAGAGTGGAAAGTGATCCAACCTGCTCAGGTCTTCAGCCTGCTGAATCATTAACCAGTGATAGAGCAGTTTCACCTGCATGCAAAAGGGTTCAGTCCAAAAATCTATCAAGCTCATCAGGTGCCCTTAGTCTGAGGTGTGAAACTGTTAATTCACCTGCCCTGACTGCATCATCATCCACTATTGTTACATCACAGAAGAATCAGTCCACTGATACATCTTCAGATTCATCAGAATCAACAGACTCATCAGATTCTGAACCTACagcaaagaagaagaaaaagggtAAAAAGTCAAAGAGGCAGAAGAAATCCAAGACAAAAATGATCGATATTAAACGAGTAAGAATCCCTGAAGACTCCATCAATCGTTACAACAAAGTTTTGCAACTGGTTAGGGATGGTTTAAGTAAAGCTGAAGCATACAACAAAGTCAAGATCGACAGGAACACAATTGTAATGCAAGTGCCCATTGCTGAGTTGGCAACAGCAAACCCACCGAATTCAAGTCTTTAAGGGCAACCTTCAAGAAGGGTGAAAGCGTTCAAAAATTTGCCAATCTCTGTCTTACACGTTGTCTTGCTCAGTCTAATATGGAGATAATAAAGCAGTTGAAAGAGAGCAATGCCCTgcttgatatttttaaaaagtgagttttCATCTGAATTATGCCAAACGTGAACaagacagtttttgtttttcacaatTCCCAACGCTGTATGTTTGCATTGctgctgtgtttatttatttttttgtttgtttaattgaattatttagttAACGCAGTCTTtgatttatataacattttgatTAATGTTGATCTGAActtgaaaatttgaaaaaaagttgTGAGATTAAAATGATCTGATCTAATAATTCAGTTGATTTACCTGACTGTTGTATTTAGTAAGAGTGCAAATAAAAGTTCTTGGTGAATGTTAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000168348

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008781 lncRNA downstream 41650 14873329 ~ 14874130 (-) True XLOC_004042
TCONS_00007702 lncRNA downstream 86456 14827374 ~ 14829324 (-) True XLOC_004041
TCONS_00008780 lncRNA downstream 156692 14754905 ~ 14759088 (-) True XLOC_004039
TCONS_00008779 lncRNA downstream 156700 14754905 ~ 14759080 (-) False XLOC_004039
TCONS_00007698 lncRNA downstream 219916 14693481 ~ 14695864 (-) True XLOC_004038
TCONS_00007715 lncRNA upstream 94000 15018138 ~ 15019527 (-) True XLOC_004045
TCONS_00007722 lncRNA upstream 345669 15269807 ~ 15281902 (-) False XLOC_004047
TCONS_00008460 lncRNA upstream 387243 15311381 ~ 15313599 (-) True XLOC_004048
TCONS_00008782 lncRNA upstream 832588 15756726 ~ 15761871 (-) True XLOC_004050
TCONS_00007728 lncRNA upstream 851314 15775452 ~ 15780923 (-) True XLOC_004051
TCONS_00007701 mRNA downstream 102717 14789022 ~ 14813063 (-) True XLOC_004040
TCONS_00007699 mRNA downstream 102751 14771908 ~ 14813029 (-) False XLOC_004040
TCONS_00007700 mRNA downstream 125862 14772598 ~ 14789918 (-) False XLOC_004040
TCONS_00007697 mRNA downstream 246754 14667066 ~ 14669026 (-) True XLOC_004037
TCONS_00007694 mRNA downstream 813622 14071689 ~ 14102158 (-) False XLOC_004033
TCONS_00007706 mRNA upstream 31346 14955484 ~ 15001702 (-) False XLOC_004044
TCONS_00007708 mRNA upstream 31346 14955484 ~ 15001702 (-) False XLOC_004044
TCONS_00007710 mRNA upstream 31346 14955484 ~ 15001702 (-) False XLOC_004044
TCONS_00007709 mRNA upstream 31346 14955484 ~ 15001702 (-) False XLOC_004044
TCONS_00007707 mRNA upstream 31346 14955484 ~ 15001702 (-) False XLOC_004044
TCONS_00007689 other downstream 1432993 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007673 other downstream 2159505 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007664 other downstream 2224089 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 2294013 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 2324484 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007741 other upstream 1093745 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 1096791 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 1134053 16058191 ~ 16058307 (-) True XLOC_004059
TCONS_00007751 other upstream 1203244 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007758 other upstream 1408686 16332824 ~ 16336886 (-) False XLOC_004066

Expression Profile


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